Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2031 ATGGCGCAACGTTCTCATGTGCCGAAATTTGGCAATTGGGAAACTGAAAATGTTCCTTATACAGCTTTCTTTGACAAGGCTCGGCAAGATCGAACTGGCACGAAGATGACGAATCCAAATGATCCAGAGGAAAATCCTGATTTAGCCCCTCACAATTCATCTTCTTCTGACCAACATCCTTCAAAACCCAGAGCTGATTTAAAGGAGCCAGCTGGAAAGAGATCAACAAGATCCTCACTTGAGGTACAGAGGAGCATGGACAGCAATCCTAATAATTCCTTTGGCTCTCCAGCTCGTTCTGGAGGCCATGGAGGAGGATCTGCTGATACCCGCAGAAAACCAAGACAAAGTGCTGGGTCTGAATACAGCTTTGAACGTTCACCCCTCCATCGACAGGCAAGGACCCCAAGCAGAGATAGTCCCTCTTGGGAAGGAAAGAACTCCTATGAAAACAGCCACGGTACCCCAGGAAGATCCCGACTAAAACCAGTTAATCGAGGCGATGAAACTCCTGATAGAGGTGCTGCTGTTCCCAAGTTTGGTGATTGGGATGAGAGAGATCCGGCCTCAGCTGATGGATATACACACATTTTCAACAAGGTGCGAGAGGAGAGACAAGGTGGAGCTGGAAATGCGCCAGGCACACCAACAAACAGACCATATGTTGTCCGGAATAAAGATGATGACGACAGAGCCCAGAGTTGCTGCTTTGGATGGTGCAAAAAATGA 729 0.4787 MAQRSHVPKFGNWETENVPYTAFFDKARQDRTGTKMTNPNDPEENPDLAPHNSSSSDQHPSKPRADLKEPAGKRSTRSSLEVQRSMDSNPNNSFGSPARSGGHGGGSADTRRKPRQSAGSEYSFERSPLHRQARTPSRDSPSWEGKNSYENSHGTPGRSRLKPVNRGDETPDRGAAVPKFGDWDERDPASADGYTHIFNKVREERQGGAGNAPGTPTNRPYVVRNKDDDDRAQSCCFGWCKK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2031 242 MobiDBLite consensus disorder prediction 162 203 - -
Prci13g2031 242 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
Prci13g2031 242 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 171 206 IPR008700 -
Prci13g2031 242 MobiDBLite consensus disorder prediction 61 75 - -
Prci13g2031 242 MobiDBLite consensus disorder prediction 134 155 - -
Prci13g2031 242 MobiDBLite consensus disorder prediction 76 98 - -
Prci13g2031 242 MobiDBLite consensus disorder prediction 33 60 - -
Prci13g2031 242 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 236 IPR040387 -
Prci13g2031 242 MobiDBLite consensus disorder prediction 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2031 Prci-Chr13 35316798 35325676 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2031 K13456 - gmx:100499218 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2031 13 35316798 35325676 Prci12g0509 12 4418391 4422502 CCT