Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0836 ATGATCTCCTCTAATAGCTGCAGTTTCCTGAGCAACACAGGAGTAGGTGGGTCTTGCAGTGGGTTCTCCGATGTGCAGAGAAGACGTTCAGGTCCTTCGATAGTGTGTATGGCTCAAAGCAGCAGGACTAATGATCGAAATGCCAGTGTTGCGGTGGAGACCAAGTTAAATGGAATTAATGACGATTCTGTGGTGGCCGACGTGAACGGTAAACCCACCATAGGCGGCGGCGTTCAGGACGCATATGGCGAGGATATAGCTACAGAGGATCAGTTTGTTACGCCGTGGAGTGTCTCTGTTGCTAGTGGATATACTTTGTTGCGAGATCCACGTCACAACAAAGGGCTTGCCTTCACCGAGAAAGAGAGGGATGCCCACTACTTGCGCGGTTTACTTCCCCCAACAACTATTGCTCAAGATACTCAGGTGAAGAAAATGATCCGACATATACGCCAGTATCAGGTTCCATTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGCGAAATGAAAGGCTGTTTTACAAACTTCTTATTGACCATGTTGAGGAGTTACTTCCAGTTGTCTATACCCCAACTGTAGGAGAAGCTTGCCAGAAGTACGGTAGCATATTTATGCGCCCTCAAGGTCTTTATATCAGTCTGAAAGAAAAGGGGAGGGTTCTTGAAGTTCTAAGGAATTGGCCTCAGAAAGACATTCAAGTCATTGTTGTAACTGATGGAGAGAGGATCTTGGGTCTTGGAGATCTTGGTTGTCAGGGAATGGGAATACCAGTGGGGAAACTTTCTTTATATACGGCACTTGGAGGAGTCCATCCATCTGCTTGCCTGCCTATTACCATTGATGTGGGTACAAATAATGAGACGTTGTTAAATGATGAACTATATATTGGGCTTAAGCAAAGACGAGCAACTGGGCAGGAATATGCTGAACTTATCCATGAGTTTATGACAGCTGTCAAGCAAAATTATGGGGAGAAGGTCCTCATTCAGTTTGAAGACTTTGCAAACCACAATGCGTTTGATCTACTTGAAAAATATAGTTCAACTCATCTTGTATTTAATGATGACATTCAGGGGACAGCATCAGTGGTCCTTGCTGGATTAGTTGCTGCCCTGAAAGTAGTTGGAGGAAATTTAGCTGACCACAGATTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGAAATTTCTAAACAGACAAATGCCCCACTTGAGGAAGCACGCAAGAATATCTGGCTGGTTGACTCAAAGGGATTGATTGTCAGTTCCAGAAAAGAATCGCTCCAACATTTTAAGAAACCGTGGGCTCATGACCATGAACCAGTTAACAATCTATTAGATGCTGTGAATAAAATTAAGCCGACAGTGTTGATTGGGACATCTGGACAAGGGAAAGCCTTCAGGAAAGAGGTTGTTCAAGCTATGGCCACCATTAACAAGAGACCTATCATTTTTGCTCTCTCCAATCCAACATCTCAATCAGAATGTACTGCTGAAGAAGCATATAAATGGAGCAAGGGGCGTGCTGTTTTCGCTAGTGGAAGCCCATTTCCTCCTGTTGAGTATGAGGGAAAAGTGTTTGTGCCTGGCCAGGCCAACAATGCTTACATCTTTCCTGGATTTGGTCTTGGCTTAATAATGTCTGGGACAATCCGAGTACATGAAGACCTGCTTCTGGCAGCCTCGGAAGCTTTAGCTGCACAAGTGAGCCAAGAGAACTTTGACAAGGGGCTCATATTCCCACCCTTCACTAACATCAGAAAGATTTCAGCTCATATAGCTGCTAATGTTGCTGCCGAGGCTTATGAGCTCGGCCTGGCCACCCGCCTTCCTCAACCAAAAGATTTGGTGAATTATGCTGAGAGCTGTATGTATTCCCCTTTATATCGTGGCTACCGGTAA 1929 0.4505 MISSNSCSFLSNTGVGGSCSGFSDVQRRRSGPSIVCMAQSSRTNDRNASVAVETKLNGINDDSVVADVNGKPTIGGGVQDAYGEDIATEDQFVTPWSVSVASGYTLLRDPRHNKGLAFTEKERDAHYLRGLLPPTTIAQDTQVKKMIRHIRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGRVLEVLRNWPQKDIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVHPSACLPITIDVGTNNETLLNDELYIGLKQRRATGQEYAELIHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLEKYSSTHLVFNDDIQGTASVVLAGLVAALKVVGGNLADHRFLFLGAGEAGTGIAELIALEISKQTNAPLEEARKNIWLVDSKGLIVSSRKESLQHFKKPWAHDHEPVNNLLDAVNKIKPTVLIGTSGQGKAFRKEVVQAMATINKRPIIFALSNPTSQSECTAEEAYKWSKGRAVFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHEDLLLAASEALAAQVSQENFDKGLIFPPFTNIRKISAHIAANVAAEAYELGLATRLPQPKDLVNYAESCMYSPLYRGYR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0836 642 ProSitePatterns Malic enzymes signature. 354 370 IPR015884 GO:0004471
Prci13g0836 642 PANTHER MALIC ENZYME-RELATED 75 641 - -
Prci13g0836 642 FunFam Malic enzyme 101 355 - -
Prci13g0836 642 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 358 641 IPR036291 -
Prci13g0836 642 Pfam Malic enzyme, N-terminal domain 167 347 IPR012301 GO:0004471
Prci13g0836 642 CDD NAD_bind_1_malic_enz 358 636 - -
Prci13g0836 642 Gene3D - 101 355 IPR037062 GO:0004471
Prci13g0836 642 PIRSF ME 62 642 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 173 197 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 269 291 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 329 347 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 488 504 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 354 370 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 385 401 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 PRINTS Malic enzyme signature 233 262 IPR001891 GO:0004470|GO:0004471
Prci13g0836 642 Pfam Malic enzyme, NAD binding domain 358 610 IPR012302 GO:0051287
Prci13g0836 642 Gene3D - 356 642 - -
Prci13g0836 642 SMART Malic_M_2 358 611 IPR012302 GO:0051287
Prci13g0836 642 FunFam Malic enzyme 356 642 - -
Prci13g0836 642 SMART malic_2 167 348 IPR012301 GO:0004471
Prci13g0836 642 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 81 357 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0836 Prci-Chr13 7024330 7030214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0836 K00029 - gmx:100791514 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0836 13 7024330 7030214 Prci12g2038 12 37930459 37936802 CCT
Prci12g2038 12 37930459 37936802 Prci13g0836 13 7024330 7030214 ECH
Prci13g0836 13 7024330 7030214 Prci13g0836 13 7024330 7030214 ECH