Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0241 ATGGAGGACGATTGGGATCTGCACGCTGTCGTCAGAGGCTGCGCCACCGTCTCCTCCTCCTCCTCCTCCTCCACCGCTGCAACCGCCTCCGCCTCCGCCTCCGTCTCTTCCTCTGTTTTTCGGCTTCCTATGTTTGCTGGGGCTGAGAAAGTTACCCAAGTTTTGTCCCTCTCGGATTTGGACCCTCTTGAAGCCGGACCCTCTTGCTCCGTTGAAGAATTGCACGAGCTTTGTAAGCCTTTCTTCTCCAAATCATCCAAGCCTCCTTCGTCATCGTCTTCACTAGTTTCCCCTCTGTCTCCTTCTTCCTCATCCTTCTCCTACAATTCTCCCTCTGTTCCCACCAAACCAGTTCAGACACAGCACAAGCAACAGAATCTGCAGCCCAAGAATAAGTTGTCTCATGCCGGTCCTGTCTCCACCACCCCGAGATCTAAAAGAAGGAAGAATCAGCTTAAGAAAGTTTGTCAGGTTCCAGCTGAGTCTCTCTCCTCTGATATCTGGGCATGGCGGAAATATGGCCAGAAACCCATCAAAGGCTCTCCATATCCAAGGGGATATTACAGATGTAGCAGCTCGAAAGGATGTTTAGCTCGGAAACAAGTGGAAAGGAACAGATCGGACCCGTCGCTGTTCATAGTCACCTATACGGCGGAGCATAACCACCCTGCTCCTACTCATCGGAACTCTCTCGCCGGCTCCACCCGCCAGAAGCCCTCAGCCGCCGCCGCCGCCGCCGGAGATGAAACAGACAAAGCCCCGACGAAAACCGGCTCTCCGGTGACGTCTGGGGTGGAAGAAGGGGAGACAGTACCTCGAAGCGCAGACTTCGAAAGCAAGGTGGAAATGGAAGATTTGATGGAGGAAGAGGAAGATGAAGAACTTGGCTTATCAGATTCTGTGTTAACAGATGATTTCTTCGAAGGGTTAGATGAACTTACCGGGCCGTCACCTCCGGCGCCGGTGGCCCCTGTTACCGTAGACTGCTTCGCCGATCCCTTCTCTACTGGTTTCGCTCTCCCGGCATGGCCGACCACTAATGCCGCTGCCACCACCGCTGGTGGCAATTGTTGA 1074 0.54 MEDDWDLHAVVRGCATVSSSSSSSTAATASASASVSSSVFRLPMFAGAEKVTQVLSLSDLDPLEAGPSCSVEELHELCKPFFSKSSKPPSSSSSLVSPLSPSSSSFSYNSPSVPTKPVQTQHKQQNLQPKNKLSHAGPVSTTPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPSLFIVTYTAEHNHPAPTHRNSLAGSTRQKPSAAAAAAGDETDKAPTKTGSPVTSGVEEGETVPRSADFESKVEMEDLMEEEEDEELGLSDSVLTDDFFEGLDELTGPSPPAPVAPVTVDCFADPFSTGFALPAWPTTNAAATTAGGNC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0241 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 314 IPR044810 GO:0003700
Prci13g0241 357 MobiDBLite consensus disorder prediction 222 237 - -
Prci13g0241 357 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g0241 357 MobiDBLite consensus disorder prediction 106 156 - -
Prci13g0241 357 MobiDBLite consensus disorder prediction 106 145 - -
Prci13g0241 357 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g0241 357 Gene3D WRKY domain 148 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g0241 357 MobiDBLite consensus disorder prediction 219 279 - -
Prci13g0241 357 FunFam WRKY transcription factor 22 148 218 - -
Prci13g0241 357 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g0241 357 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0241 Prci-Chr13 1676065 1677918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0241 1 355 WRKY Transcription Factor Family AT4G01250 48.066 3.21e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g0241 WRKY 6.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0241 K13425 - gmx:100798084 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0241 13 1676065 1677918 Prci13g0241 13 1676065 1677918 ECH
Prci12g2038 12 37930459 37936802 Prci13g0241 13 1676065 1677918 ECH