Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2505 ATGGGCGAACATGAGGGGTGGGCACAGCCCTCTGGTGGTCTATTGCCAAATGGTCTGTTGCCCAATGAGGCTGCCTCGGTAATTCGAGTGCTTGACTCAGAGAGATGGTTAAAGGCTGAAGAAAGGACTGCAGAACTCATTACCTGCATTCAGCCTAACCCACCCTCTGAAGAACGTCGAAATGCAGTTGCTGACTATGTGCAGCGGCTGATCATGAAGTGCTTCCCCTGCCAGGTGTTCACCTTTGGGTCTGTGCCCCTTAAAACTTATTTGCCTGATGGAGATATTGACTTAACGGCATTCAGTAAAAATCAAAATTTGAAGGATACATGGGCACATCAGGTTCGTGATATGCTGGAGAGTGAGGAGAAGAATGAGCATGCAGAGTTCCATGTGAAAGAGGTCCAGTACATCCAGGCTGAAGTGAAGATTATAAAATGTCTCGTTGAAAATATTGTGGTTGACATATCATTTAACCAGCTTGGGGGGTTATGTACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGTATCATACTGATAAAAGCCTGGTGTTATTACGAGAGCCGTATACTTGGTGCCCACCATGGACTCATCTCAACTTATGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCTTTTGCTGGACCACTTGAGGTATTGTATCGTTTTCTGGAGTTTTTCAGTAAGTTTGACTGGGATAATTTCTGCGTAAGCCTATGGGGTCCGGTACCCATTAGTTCTCTCCCAGATGTTACAACTGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTTAGCAAGTTGTTTCTTGATGCTTGTAGCTCAGTTTATGCTGTTTTCCCTGGCGGTCAAGAAAATCAAGGGCAAACCTTTGTTTCCAAGCATTTTAATGTTATTGATCCTTTGCGTGTTAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTACAGGATACGTAGTGCTTTTGCATTTGGGGCTAGAAGGCTTGCCAGATTACTTGATTGCCCAAAGGAGGACTTATATTCTGAGGTCAATCAGTTCTTTATGAACACTTGGGACAGACATGGAAATGGGCAGCGGCCTGATGCTCCAAGCAATGACTTATGGAGTTTGAGATTATCTAATCATGACCAATTACAGGGGTCTCAGAATCTCAGGAAAAACAGCCAAAAAATTGAAAATATCAGTGATCGTAAATACCAAGCTGAAGGGACACACGGTTCACGAAGTGGCCCATCTCATCATAGTAGCTCATTTAAGAGTAGTGATGCTTCTACTGGATCACATACACAAAGTGGAAAGGCCCATAGCAACCAAAACAATTTAAGGACCTCTGACCAGGTCAAAAGGGAAATCAGTTCTAATCAGCATGCTTATGTTGATAAAGGTCAGGGAAATGTTAAACACAATAATCCAATGATTGATATTCAAGGAAGATTTGTATTTGCAAGAACCCGCTCCAGTCCTGAGTTGACTGATTCATATGATGAAGTTTCCTCCCAAGGAAGTTCTGCAAGGGCCCAAGAAAGTGGGAAAGGGCAGAATTCCTCTGCAAGGTTGGATAATACTCATAGGAGGAATCTTGAAGCTGACATGGCATCAAGCCACGGTGTTAGAATTGATGATACATCCTCTACACGTTTATCACCCAGTCATGTCCTTGATGATGCTGCTGATATTCAGAGTGACTCAAATAGTTACCATGGTGACTCACCCTCTGGTGTAATGGGTGGAGATTTTGTGTCTCTGGCTGGAAAAGGAGCATCTCAGATGATGCTTCAGGAGGAGCAAGATCTTTTGAACATGATGGCATCTTCAACAGCTCATGGTTTTAGTGATCGTGTTCATGTTCCTGTGAATTTAGCTCCAGGTCATCTACCACTTCCATTTCCACCTACAATTCTTACATCAATGGGATATGCACAGCGAAATGTGGGTAGTATTCCCTTGATTGACGCTTCTTGGGGCACAAACATGCAGTTTCCTCAAGGTTTAGTCCCTTCTTCATTGACTCCATATTTCCCTGGCATAGGATTGACTTCAAATCCTGAAGATACAATTGAAACCAGTAATGATAGTTTTAGTGCTGTTGAAATGAATCCAGCAGCCAATAGTGGTTTCTGGCATGAGCAAGAACGGGGCCCTGTTACTGAGGTTGAAGTTGATAATGGGATTCTGGATGATAAACAACAGTCAACTTCTGGCAGTTATAACTTTGTTTCATCATCCCGAGTTAGCAGCTCTGGTAGTTCTGGTAGAAATCAACAGAAGTTCACTAAAGAAGACAAAGGATTTACAAGAGAAGAACATGTTGATAATTTTCAATATCAAGATAGCAGGGGAAATGAGGTTTGTTTCGATGATAGAATGGCAAATTCTAGGTTAATCAGTGCTCCTTTGAGTTCCAAGACTAAAACTTCCTCTGAAAGCTCTTGGGAGGGATCACCAGCAAAATTTTCAAAGTCAACAAAGGAAAAAAGAGGTAGGAAGAATATCCCCTCAGGGGTATCAACTGGTTATGGGAAGGGAAAGGATGTATCGGAAATGTCATCTAACCTGGCAGATGATGAAAACGGAGAAAGATCGTCTTTTTCAACAACTAATATGGCAGAAAGAAGTACAGGTGCCCCAGCTGTTGCTTCCATGCATGTCCCAAGGCATCAAGCACCTGGATTCGAACCATTTCAGACAAGTGAATCAGATTCACTGATACCTATAACTCCAGTGCTTTTAGGTGGAGGTTCTCGCCAAAGAGCAGTTGATAATTCTGGGGTTGTTCCATTTGCATTTTATCCTACGGGGCCACCTGTACCCTTTTTTATGCTTCCAGTGTATAATTTTCCAACTAAGTCAGGAACTTCTGACACATCAACAGGCAATTTTAATGGGGAAGAATTGGTGGATAACAGTGATTCTGGTCAGAATTTTGATTCATCTGAGGGGTATGAGCAGCCTCAAGTGTCAAGCCCTCCTAATTCTATTAGAAGAGCTACTTGTGAGTCATCAGAGCAAAAGTCTCACATTCTTGACAGTGACTTTGCGAGCCATTGGCAAAATTTGCAATATGGGCGGTTTTGTCAAAACTCACGCCATCCACCTTCAATGATCTATCCTTCACCTGCACCTCCTGTTTATTTGCAGGGTCGTTTTCCTTGGGATGGTCCTGGAAGACCCCATTCAACTAACGTGAATCTTGTTGCTCAGTTTATGAACTATGGGCCACGATTAGTACCTGTTGCTCCTCTCCAGTCGGCTTTGAACAGACCTGCCAATGTTTACCAACGTTTTGCAGATGGGATGCCACGTTATCGAAGTGGCACTGGAACCTACCTGCCAAATCCTAAAGTTTCTGCTCGAGATCGACAATCCACAACCCGAAGAGGAAATTACAACTATGAAAGGAGTGAGCACCATGGTGATAGGGAAGGAAACTGGAATATGAGCTCAAAGCTGCGAGCAACTGGACGTGGTCATAATCGCTACCAAACTGAGAGGCCAAACTCAAAGCCAGAGAGGTTGGCAACAAGTGAGAGCCGAGCTGAAAGGCCATGGCGGTCACATAGACATGACTCCTCCATGTCTTACCACACACAGAATGGTCCAGTACGCTCAAATTCCTCACAGAACAGTTCTTCCAATGTGGCATATGGGATGTATTCTCTGCCTGGCATGAACCCCAGTGGGGTCTCATCAAATGGACCAACAATGCCGTCTGTTGTAATGCTGTACCCCTATGATCATAATACTGGCTACAGTTCACCAGCGGAGCATGTGGAGTTTGGATCTTTTGGACCAATGGGTTTCTCAGGTGTTCATGAACTATCACTAAATGATGGAAGCCGATCTGGTGGAGCATTTGAGGAGCAAAGGTTTCATGGAGGTTCTGCTCAACGATCTTCACCAGATCAACCCTCTTCACCCCGCGTCCCAAGGTGA 3987 0.4352 MGEHEGWAQPSGGLLPNGLLPNEAASVIRVLDSERWLKAEERTAELITCIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLESEEKNEHAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTTEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQTFVSKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFAFGARRLARLLDCPKEDLYSEVNQFFMNTWDRHGNGQRPDAPSNDLWSLRLSNHDQLQGSQNLRKNSQKIENISDRKYQAEGTHGSRSGPSHHSSSFKSSDASTGSHTQSGKAHSNQNNLRTSDQVKREISSNQHAYVDKGQGNVKHNNPMIDIQGRFVFARTRSSPELTDSYDEVSSQGSSARAQESGKGQNSSARLDNTHRRNLEADMASSHGVRIDDTSSTRLSPSHVLDDAADIQSDSNSYHGDSPSGVMGGDFVSLAGKGASQMMLQEEQDLLNMMASSTAHGFSDRVHVPVNLAPGHLPLPFPPTILTSMGYAQRNVGSIPLIDASWGTNMQFPQGLVPSSLTPYFPGIGLTSNPEDTIETSNDSFSAVEMNPAANSGFWHEQERGPVTEVEVDNGILDDKQQSTSGSYNFVSSSRVSSSGSSGRNQQKFTKEDKGFTREEHVDNFQYQDSRGNEVCFDDRMANSRLISAPLSSKTKTSSESSWEGSPAKFSKSTKEKRGRKNIPSGVSTGYGKGKDVSEMSSNLADDENGERSSFSTTNMAERSTGAPAVASMHVPRHQAPGFEPFQTSESDSLIPITPVLLGGGSRQRAVDNSGVVPFAFYPTGPPVPFFMLPVYNFPTKSGTSDTSTGNFNGEELVDNSDSGQNFDSSEGYEQPQVSSPPNSIRRATCESSEQKSHILDSDFASHWQNLQYGRFCQNSRHPPSMIYPSPAPPVYLQGRFPWDGPGRPHSTNVNLVAQFMNYGPRLVPVAPLQSALNRPANVYQRFADGMPRYRSGTGTYLPNPKVSARDRQSTTRRGNYNYERSEHHGDREGNWNMSSKLRATGRGHNRYQTERPNSKPERLATSESRAERPWRSHRHDSSMSYHTQNGPVRSNSSQNSSSNVAYGMYSLPGMNPSGVSSNGPTMPSVVMLYPYDHNTGYSSPAEHVEFGSFGPMGFSGVHELSLNDGSRSGGAFEEQRFHGGSAQRSSPDQPSSPRVPR 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2505 1328 MobiDBLite consensus disorder prediction 969 1019 - -
Prci12g2505 1328 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1325 - -
Prci12g2505 1328 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 1137 1162 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 509 538 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 814 835 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 423 463 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 539 553 - -
Prci12g2505 1328 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 1174 1209 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 509 569 - -
Prci12g2505 1328 Gene3D - 162 359 - -
Prci12g2505 1328 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 1120 1231 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 1292 1328 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 745 793 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 873 891 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 814 891 - -
Prci12g2505 1328 SUPERFAMILY Nucleotidyltransferase 25 201 IPR043519 -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 773 793 - -
Prci12g2505 1328 CDD NT_PAP_TUTase 59 166 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 1210 1231 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 969 1016 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 416 463 - -
Prci12g2505 1328 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Prci12g2505 1328 MobiDBLite consensus disorder prediction 745 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2505 Prci-Chr12 42602590 42611201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2505 - - gmx:100809742 1890.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2505 12 42602590 42611201 Prci12g2505 12 42602590 42611201 ECH