Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2459 ATGGCCAACCCGGTCACCTTGTTTCTTCTGGGGCTAAGCGTAATGTCTACTCTCTACAATCTGAAACTTTTGGCAGATGGAAGGTCCGTGGGAGGACCAACCAGGTTCTATGATTTTAAGGTACAAACCAAGAAAGTTACCAAACTCTGCAGCTCCAAAGACATTGTCACAATCAATGGCATGTTTCCAGGACCTGTGGTTTATGCTCAAGAAGATGATAGAATCATCGTTAAAGTTACCAATCAGACACCTTTCAATGTCACAATCCACTGGCATGGTGTTCGGCAGAAGCTTTCATGCTGGTATGACGGGCCATCATATATTACACAATGTCCAATTCAAGCAGGTCAAGCTTTCACGTACAATTTTACAGTGGTGAAGCAGAAGGGTACATTCTTCTGGCATGCTCATGTTTCGTGGCTCCGAGGAACTGTTTATGGTGCCATGATTGTTTATCCAAAGGCTGGGTTCTCTTACCCGTTCAAGATTCCCTATCAAGAGCAAACAATCATACTGGGGGAATATTGGCTAAAGGATCTTGTACAGATTGAACAAGCCACTCTAGCAAGTGGAGGAGCACCTCCAAGACCAGATGCATACACCATTAACGGTCATCCAGGCCCCAACTACAATTGCTCCACTAATGATGTCCACAAAATTGATGTCATTACCGGGAGGACCTATATGTTCAGACTCATTAATGCAGGTCTAAACACGGAGAACTTCTTTGCCATTGCTAACCACAAATTAACAATCGTGGAAGCCGATGCTGAATACACCAAGCCATTCACAACAGATATAGTAATGGTGGGACCAGGCCAGACAATGATTGCCCTAGTCACAGCTGATCAACCAGTAGGAAGATATTCCATTGCTGTGGCACCTTACAAGTCTGGAAGGATCGTTAATTATCAAAATACTTCAGCCATTGCTTATTTCCACTATATTGGTGCAGCACCTGATAGCTTATATTTATCAGCTAAACTACCTAAACTTGACGACAGCCTGGCTGTCAAGACATTCATGGATGGACTAAGGAGCCTCAATCAAGTCAATGTTTTCAAAGAGATTGATGAAAACTTATTCATTACCATTGGATTGAACGTCCAAATGTGTCATTCAAAGACACCAAATCAAAGCTGCCAAGCCATTAATGATGGTATCATGGCTGCTTCAATGAACAATATAAGTTTCATTCAGCCCAAGCTGTCAATTCTTGAAGCTTATTATAGGAAGATAAATGGATCGTATACTGAAGATTTTCCTGATGCGCCCTCTAAGCTCTATGACTTTGTATACGGGGCACCTAATAACATTCCATACAACACACAGTCATTGAACGGGACCAGAACAAAGGTCCTTGAATATGGCAGTAAGGTGCAACTCATTCTGCAGGACACTGGCACAGTAAACACTGAAAATCACCCAATGCATTTTCATGGTCACAGCTTTTATGTCATAGGTTATGGCACAGGGAACTATAACCCACAAACTGCAAAATTCAACTTAGTGGATCCCCCTTACATGAGCACAGTTGGAGTTCCAGTGGGTGGATGGGCAGCAATTCAATTCGTTGCTGATAATCCAGGGGTATGGTATATGCACTGTCACATCGACATACACCAATCATGGGGGCTAGGAATGGTGTTTATTGTGAAGAATGGAAAAGGAGAGCAGGAATCCTTACCACACCCTCCAACAGACATGCCACAATGTTAA 1719 0.4287 MANPVTLFLLGLSVMSTLYNLKLLADGRSVGGPTRFYDFKVQTKKVTKLCSSKDIVTINGMFPGPVVYAQEDDRIIVKVTNQTPFNVTIHWHGVRQKLSCWYDGPSYITQCPIQAGQAFTYNFTVVKQKGTFFWHAHVSWLRGTVYGAMIVYPKAGFSYPFKIPYQEQTIILGEYWLKDLVQIEQATLASGGAPPRPDAYTINGHPGPNYNCSTNDVHKIDVITGRTYMFRLINAGLNTENFFAIANHKLTIVEADAEYTKPFTTDIVMVGPGQTMIALVTADQPVGRYSIAVAPYKSGRIVNYQNTSAIAYFHYIGAAPDSLYLSAKLPKLDDSLAVKTFMDGLRSLNQVNVFKEIDENLFITIGLNVQMCHSKTPNQSCQAINDGIMAASMNNISFIQPKLSILEAYYRKINGSYTEDFPDAPSKLYDFVYGAPNNIPYNTQSLNGTRTKVLEYGSKVQLILQDTGTVNTENHPMHFHGHSFYVIGYGTGNYNPQTAKFNLVDPPYMSTVGVPVGGWAAIQFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGKGEQESLPHPPTDMPQC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2459 572 Gene3D - 373 572 IPR008972 -
Prci12g2459 572 Pfam Multicopper oxidase 168 317 IPR001117 -
Prci12g2459 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Prci12g2459 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Prci12g2459 572 Gene3D - 165 350 IPR008972 -
Prci12g2459 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Prci12g2459 572 SUPERFAMILY Cupredoxins 356 572 IPR008972 -
Prci12g2459 572 Gene3D - 24 153 IPR008972 -
Prci12g2459 572 SUPERFAMILY Cupredoxins 165 322 IPR008972 -
Prci12g2459 572 NCBIfam laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Prci12g2459 572 Pfam Multicopper oxidase 427 555 IPR011706 GO:0005507|GO:0016491
Prci12g2459 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Prci12g2459 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Prci12g2459 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Prci12g2459 572 PANTHER MULTI-COPPER OXIDASE 42 560 IPR045087 -
Prci12g2459 572 SUPERFAMILY Cupredoxins 30 176 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2459 Prci-Chr12 42250856 42253736 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2459 K05909 - gmx:100789406 984.941