Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2441 ATGCTGGAGAATCCGCTTTACAGGAAGGTCTCTCTTTATCTGCATTCTCTACCTTCCCTTGAAGACTCTGATTTTACCAATTTGATCACCCGGAAGAAGAACAATGATATCGTTCTCTGCCTTGACCCCAAACAAACCATCGAGGACGATTTTCTCGGAGCCAGAGTTTTCTGGCTCAATGAAGGAGACGAAAAGTCCGTGTCAAGCCGTAACAGAGCGTTCATCCTGAAGATTAGGAAGGCCGACAAACGCCGAATTCTCCGTCCTTATCTTCAGCACATCCACACCATCGCTGACGAAATCGAGCAACAGGAAAAACGTGATTTGAGGCTGTTTATGATCACGGACCCTATTGGCGGCGGGAAAGGACGGTGGAGATCCGTCCCGTTCACGCACCCCTCAACTTTCGACACCATTGCCATGGAATGCGACCTCAAGAACAGGGTGAAATCCGACCTCGAATCGTTCCTGAAGGCGAAGCAGTACTACAACCGACTCGGTCGCGTATGGAAGCGTAGCTTCCTCCTGTACGGCCCTTCTGGCACCGGAAAATCGAGCTTTGTCGCCGCAATGGCCAATTTTCTCTGCTACGACGTATATGACATGGATCTCTCGAAAGTCCCAAGCGATTCAGACCTGAAATCCATGCTGCTCCAGACGACCGCGAAATCAATCATCGTCGTGGAAGACCTCGATCGTTTCCTTATCGAGAAATCAAAGGCGGTGAGCTTATCGGGGATTCTGAACTTCATGGACGGGATTTTGAGCTCGTGCTGTGCCGAGGAGATGGTCATGGTATTCACGATGAACAGCAAAGAGCACGTGGATCCGGATATGCTCCGTCCGGGTCGGGTCGATGTCCACATCCAGTTTTGCCTGTGTGATTTCCTGGCGTTTAAGACACTAGCAAGCAGCTATTTGGGGTTGAAGGAACACAAGCTATTCCCTCAAGTGGAGGAGATGTTTCAGAAGGGAGCGAGTCTGAGCGCGGCGGAAATTGGCGAGTTGATGATCGCGAATCGCAACTCGCCGAGTCGGGCAATTAAATCGGTCATCGGTGCCTTGCGGACGGACGGCGATGGGAGAGGGCGCGGCGGGAAGATAGGACGGCAGTTAGTGGACCGCAGCGTGGACGTAATGGACGAACCAGATGGCGTGCTGTGCGGTGATGGTTTCCATACGGTTAAGGATTTGCGAAAACTGTACGGTTTCTTTAGATCAAAGAACCACAAAAAATCTCAGCCGTTATTGCTAAGGCGATGA 1263 0.5123 MLENPLYRKVSLYLHSLPSLEDSDFTNLITRKKNNDIVLCLDPKQTIEDDFLGARVFWLNEGDEKSVSSRNRAFILKIRKADKRRILRPYLQHIHTIADEIEQQEKRDLRLFMITDPIGGGKGRWRSVPFTHPSTFDTIAMECDLKNRVKSDLESFLKAKQYYNRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDMDLSKVPSDSDLKSMLLQTTAKSIIVVEDLDRFLIEKSKAVSLSGILNFMDGILSSCCAEEMVMVFTMNSKEHVDPDMLRPGRVDVHIQFCLCDFLAFKTLASSYLGLKEHKLFPQVEEMFQKGASLSAAEIGELMIANRNSPSRAIKSVIGALRTDGDGRGRGGKIGRQLVDRSVDVMDEPDGVLCGDGFHTVKDLRKLYGFFRSKNHKKSQPLLLRR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2441 420 PANTHER BCS1 AAA-TYPE ATPASE 7 356 - -
Prci12g2441 420 Gene3D - 126 293 IPR027417 -
Prci12g2441 420 Pfam ATPase family associated with various cellular activities (AAA) 175 291 IPR003959 GO:0005524|GO:0016887
Prci12g2441 420 Pfam Domain associated at C-terminal with AAA 3 58 IPR025753 -
Prci12g2441 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 350 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2441 Prci-Chr12 42079346 42081362 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2441 - K08900 qsa:O6P43_018558 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2441 12 42079346 42081362 Prci12g2441 12 42079346 42081362 ECH