Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2380 ATGAGTCACTCAGAGGAGAATAAAGAAGCTTCAGCTCCAGAAAACCGACCAGTTCCTCGTTTGAACGAAAGGATTCTTTCATCTTTGTCAAGGAGATCGGTTGCCGCCCACCCCTGGCACGATCTTGAAATTGGACCTGGAGCCCCCATTATTTTCAATTGTGTTGTGGAGATCACCAAGGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACTGGATTGATTAAGGTTGACCGGGTCTTGTATTCATCTGTCGTTTATCCTCATAACTATGGCTTTATTCCTCGTACACTGTGTGAAGACAACGATCCACTTGATGTCCTGATTATAATGCAGGAGCCAGTTCTTCCCGGTTGTTTCCTGCGAGCCAAGGCCATTGGGTTGATGCCCATGATTGACCAGGGAGAGAAGGATGATAAGATAATTGCAGTATGTGCCGATGATCCAGAGTACAAGCACTACAATGACATCAAAGAACTTCCACCTCATCGTCTCTCTGAGATTCGACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTAGCTGTTAATGAGTTCTTGCCCTCAACCACTGCTGTTGAAGCGATCCAGTATTCAATGGATCTTTACGCGGAGTATATTCTGCACACCTTGAGGAGATAG 648 0.4506 MSHSEENKEASAPENRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPIIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPSTTAVEAIQYSMDLYAEYILHTLRR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2380 215 CDD pyrophosphatase 51 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Prci12g2380 215 Gene3D Inorganic pyrophosphatase 33 211 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Prci12g2380 215 PANTHER INORGANIC PYROPHOSPHATASE 7 215 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Prci12g2380 215 Pfam Inorganic pyrophosphatase 54 205 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Prci12g2380 215 ProSitePatterns Inorganic pyrophosphatase signature. 101 107 - -
Prci12g2380 215 FunFam Soluble inorganic pyrophosphatase 4 33 211 - -
Prci12g2380 215 Hamap Inorganic pyrophosphatase [ppa]. 50 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Prci12g2380 215 SUPERFAMILY Inorganic pyrophosphatase 31 211 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2380 Prci-Chr12 41499495 41503685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2380 K01507 - gmx:100500365 402.905