Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2352 ATGGCGGAGAAATCATGCATGAAGCGCCTTCAGAAGGAATATAGAGCTCTTTGTAAAGAACCAGTGCCCCATGTTGTTGCTCGTCCATCACCTAATGATATACTTGAGTGGCATTATGTGTTGGAAGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTATTATGGCAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGCTTCATTACGCAGAAGAAGATCTGCTTGTCCATGAGTGATTTTCATCCAGAAAGTTGGAATCCTATGTGGTCCGTATCAAGTATACTTACGGGGCTTCTATCCTTCATGATGGACAGCAGTCCAACTACTGGCAGTGTGAGCACTACTACTGAAGAGAAGCAACGCTTGGCAAAATCTTCCCTTGCTTTCAATTGCAAGAATGCAACATTCAGGAAAATGTTCCCTGAGTATGTTGATAAGTACAACCAGCAGCGGCTTTCCGAGCAAGCTGCCTCTGAAAAAACAGCATCTGAGGTGGCATCTCGGGACAAAAGTTCAAGGCCCATGTTGAGAAAAGTTAGAGAGTCTACAGGAGAAGACACGAAAGCAGTAGATGAATTGAAAGAGGTGAGGAATAACAGAAAGCAATCTTTACCCACATGGATGATGTTGTTGCTCCTCTCCATTTTTGGGGTTATAATGGCATTGCCTCTACTTCAGCTGTGA 723 0.4343 MAEKSCMKRLQKEYRALCKEPVPHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFITQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDSSPTTGSVSTTTEEKQRLAKSSLAFNCKNATFRKMFPEYVDKYNQQRLSEQAASEKTASEVASRDKSSRPMLRKVRESTGEDTKAVDELKEVRNNRKQSLPTWMMLLLLSIFGVIMALPLLQL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2352 240 SMART ubc_7 8 162 - -
Prci12g2352 240 Pfam Ubiquitin-conjugating enzyme 9 123 IPR000608 -
Prci12g2352 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Prci12g2352 240 SUPERFAMILY UBC-like 6 156 IPR016135 -
Prci12g2352 240 Gene3D Ubiquitin Conjugating Enzyme 1 212 IPR016135 -
Prci12g2352 240 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Prci12g2352 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 145 - -
Prci12g2352 240 CDD UBCc 7 157 IPR000608 -
Prci12g2352 240 MobiDBLite consensus disorder prediction 167 199 - -
Prci12g2352 240 MobiDBLite consensus disorder prediction 176 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2352 Prci-Chr12 41207858 41212483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2352 1 240 Miscellaneous Gene Families AT1G17280 75.620 7.88e-137 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2352 K04554 - gmx:100778181 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2352 12 41207858 41212483 Prci12g2352 12 41207858 41212483 ECH