Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2345 ATGGATCTCCCCAACCACAAATACTTTCGACCTTCTCCTCTTCTGTCATCTTCAAATGGGGAATTGGAGGGCAAGATCGACTTGTTTGGGAGGAGCAAAGAAAACCCATTTCCAGACCCACTTTGCAAGCTCAATCTCAGAGAGACCTCTGAGTTTGTCAAGTCATTTCCAATGTCGAATGGTGGAAGCACAGAGAGCAGGGGCTGTATTCTTCAGGGTTCGACTCAGAGAGGGAGAGAAGAAGGCTCTAACTCGGTCACAAACAGGAGATTGGAGACTCCTTCAACTCCTGGTAGACCTGTTTTCTGCTTTACGAGTGTTGGAAATCTCTCGAGGAAGAACTTTCCTTCGAAATGGGATGATGCAGAGAAATGGCTCATAAGTAGCTCTTGCCATGACTCTCCTGCTCATACTGTGAAGGTATCAGAAAATTCAAAGGTTAGCAGCCAATGTGATAACTTTAAGAAACAAATGGAGGATCTCTCGGAGAAATCGAGGGTTACGGAGGAAAGGGCATCGAACACTGTCCCAAGCTTTCAAGGGTCCGTGTCTTTGGACCACCATAACTCAGACATGGTTCTAAAAGACAAGTTCACAGACAATCCAGACCCTATTCTGCCTAAATTCAGATATTCAGAACCAACCAAGACGTTTCTTTTCAGAAACCCTGGTGGTGAGGCAATGAAAGATGCTTGCACGGAAATGGTTCATGAGGTTCAACACAGAGATGTTGGGACAGAGATGACTCCTCTTGGAAGTTCAACCACTTCAAGGTGCCACACACCCTTCAAGAGCTCATCCCCTGCTCGCCATAATACTCCAGCTAGCAGGTCAGGACCATTGGTCCTAGCAAACCAAAACGACACTGGCTGTACTATTGATGTTATTCAGCTCGAGGAGTGCCATTTCGCTAAACTGCAATTAGGAACACAGTATGGTTCAGTCACATCAAATTGGAGCTCGAGGGAGGAGGAGGAGGAGGAGATATCAAAGAGCTTGAGACATAGCACCAGCCAGAAAGCTGATATAGACTGCAGAGCTGCTACATGGGAAGAAGAGGAAAAGACCAAGTGTTGCCTCAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTTAATCTCCAAAGTGCAAAAGCAGAAGCTCAATCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAAATCAAACCTGGAAGAGAAATTGATGAAGAGGATGGCAGCGGTTCACAGAAAAGCCGAGGAATGGAGAGAAGCTGCGAAACAACAGCACCTGGATCAGATCCAGAAGGCGACGGAACAAGCTCACAAGATGATGAACCGCCATAACCCTCATTTCTCAAATCACCGATCCTGTGGTTGCTTCCCCTGCAATAATAACACCCATTGCTAA 1392 0.4605 MDLPNHKYFRPSPLLSSSNGELEGKIDLFGRSKENPFPDPLCKLNLRETSEFVKSFPMSNGGSTESRGCILQGSTQRGREEGSNSVTNRRLETPSTPGRPVFCFTSVGNLSRKNFPSKWDDAEKWLISSSCHDSPAHTVKVSENSKVSSQCDNFKKQMEDLSEKSRVTEERASNTVPSFQGSVSLDHHNSDMVLKDKFTDNPDPILPKFRYSEPTKKXFLFRNPGGEAMKDACTEMVHEVQHRDVGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLVLANQNDTGCTIDVIQLEECHFAKLQLGTQYGSVTSNWSSREEEEEEISKSLRHSTSQKADIDCRAATWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMKSNLEEKLMKRMAAVHRKAEEWREAAKQQHLDQIQKATEQAHKMMNRHNPHFSNHRSCGCFPCNNNTHC 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2345 464 Coils Coil 378 405 - -
Prci12g2345 464 MobiDBLite consensus disorder prediction 1 21 - -
Prci12g2345 464 PANTHER OS02G0116800 PROTEIN 78 456 - -
Prci12g2345 464 Coils Coil 144 171 - -
Prci12g2345 464 MobiDBLite consensus disorder prediction 248 282 - -
Prci12g2345 464 MobiDBLite consensus disorder prediction 55 94 - -
Prci12g2345 464 CDD UDM1_RNF168_RNF169-like 382 439 - -
Prci12g2345 464 MobiDBLite consensus disorder prediction 247 282 - -
Prci12g2345 464 Pfam Remorin, C-terminal region 347 443 IPR005516 -
Prci12g2345 464 Coils Coil 422 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2345 Prci-Chr12 41147173 41152032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2345 - - pcin:129298309 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2345 12 41147173 41152032 Prci12g2345 12 41147173 41152032 ECH