Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2339 ATGGTTGCTCGACGGAGGACATTCTCTGAAGTTGTGAGCATCGTCAAGTCATGGATTCCTTGGCCACCTCAATCTGAGTCGACAAATGTGTCCAGGGTTTTTTGGATGGCCAAAAACAGTTGTACAGTATGCTATGGGTGTGATTCCCTATTCAACTTAACTAATCGCAGGCACCATTGTCGTCATTGTGGCAAAATTTTTTGTGCCAGCTGTACCTCAAACTTAGCTCCTGCTCTATCTAGCGACCAAAGGAACTTGTCGGATGAGAGGGACAAGGTTCGGGTATGCAATTTTTGCTACAAGCAATGGAAGCAGGGCTTAGCTAGTTGTAATAGTAATAATCAGGTCCTCAGTTTGGATCATAGTTCTTCAGCATCAACTTCAAGCTTTATCAGTACCAAATCTGTTGTCACCGCTAATAGTAGTAACAATATTGTTTGCTCCCTTCCCGTTTCGGTTGGTTGTTATCAACAAGGGCAACAATCTGGTGTGAGCCTACATCGATCATCTATGAAATTAGAAAGTCTTGATAGGGAAATTTTATCAGCACTTAGGAGGGATCTTGTGGCAAGCCTTGGGAATTCATCATTAAAGCAATACGAATACTCAATGAAAGGGAGCGGTGATGAAGAGGATGATTACAGTGTGTATCAGTCAGCTTCTGAAATGAGGCATTATTCAGGAGTCGGTGGCTACTATGGTCAAGCTGATTTTGATGGAATTAACGACATTGATGGATCACAAGTGCATCCTGATGAAGATAACATCAATACAGGAGTTCTATGCAACTCTTTTGAGCACCAATACTTTGACATGAGGGGTTTGGATGAAATCCCGGCTATCATAAAAAATGAAGATGAGCCTGATATGTTTGATGAAAACGAAGCACCTTCTTCTTTATATGTTTCAGCAGATATTGATGCTGAACCCTTAGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCGGAAGACGAAGAATATGAACGAGAAGACATGTTATTTGACAATGAAGATGATTATTATGGGAATGACATAGGAGAGTGGGGGTATGCTCACTCACCAAGCAGCTTCGAAAGTGGAGAGGACCCGAATAGAGATTCGTCATGTGAGGAACAGAGAATGGGCACAAGCAATGTAGTTGATGAACATTTTAGGGCCCTGGTAGCACAGCTGTTACTAGTTGAAAACCTACCAGTTGAAGAAAATGATAACAACAGTTGGTTTGAAATCATCACTTCTCTATCATGGGAGGCTGCTAGGTTATTGAAACCAGATACAAGCCAAAGTGGTGGGATGGACCCGGGTGGATATGTGAAGGTCAAATGCATAGCATGCGGGAGCCGCAGCGAGAGTGTGGTTGTTAAAGGAGTTGTCTGTAAGAAAAATGTGGCTCATCGGCGAATGAGATCAAAAGTAGATAGACCTCGCTTGTTGATCCTTGGAGGGGCGCTTGAGTATCAGCGTGTTACCAATCTCTTGACTAGTGTAGATACCCTATTGCAGCAGGAAATGGAGCATTTGAAGATGGCGGTGGCAAAAATAGCTACACAACAACCTGATATCCTTTTGGTGGAGAAATCAGTTTCTCGATACGCACAGGAATATCTTCTTGCACAAGGCATATCATTGGTTCTCAATGTCAAAATGTCATTTCTGGAGCGCATAGCACGCTGTACGGAAACTCAGATAGCACCTTCAGTTGATCATCTATCATCGCTGAAGTTGGGCAGCTGTGAAACATTTCGTGTGGAAAAGTTTATTGAAGACCTAGGTAGTGCTGGTCATGAAGGGAAAAAATCTGCAAAGACGTTAATGTTTTTTGAAGGCTGTCCTAAGCCGTTGGGTTTCACGATTTTACTTCGAGGTGCTGACAAGGATGAACTGAAGAAGGTAAAGCATGTGGTACAGTATGGAGTTTTCGCAGCTTACCATTTGGCCATGGAGACATCTTTTCTTGCTGATGAAGGAGCCTCACAAACAGAGTGTCCTTTGAATGGTCCAATACCTGTGCCCATTCCAGAGAAATCACCGGTCATTGAGAGGTCCATCTCAACAGTGCCTGGTTATCCCATTCCTGGCAGCGAAAAGTCTCTGGGACCTGAACTTGGCACTGAACTACAGAGAGCCAAAAGCATCTCAATTGCTGAGCTTGCCTCACTTATTGGCGGTAAAGAGACCTCCTTGTCTTATGCTCCTTATTCATCTATGCCACCAGGTTCAAGTTACAGCAACTCAACTACCTTTTACCCCTCTTCTTTTCCTTCATCAACTTCAATGTCCTATTATGAGAAGCCTCTTACAAGTGAAGATATAAATAAAATGGAATCTAAAATATCTCTCATGTCGGGAACTTCTGTAATGAACTGTTCTCTTGAAATTATGGATAATCATCCTTCTCCTTCTGTAAATGAATATTGGACTTCAGATAAATTTGCTCATCACATCCAGACAGACACACCTCAGAACAGTCTCAGCCAAATGTCCACGACACTGAGTGCTTTGAAGCTGTCGCCTTTAGAAGTTGGTCAAAGCCATTCCAAAGAGACAGAAGCAGTGAATGAAGAGCAATTACTTGCTGAAGAAGTGTTTCCGCCATCACCTACTGATCATCAAAGTATTTTAGTGTCCATGTCCTCCCGATGCGTATGGAAGGGAACCGTGTGTGAGAGGCCCCATATTTTTCGTATTGCATACTATGGAACCTTTGACAAACCCTTGGGTCGGTTTTTGCGGGACTGTTTACTTGATCAGAGTTATCAGTGCAACTTCTGTGAAATGCCATCAGAAGCACATGTGCATTGCTATACTCATCGGCAGGGAACCATCACCATATCAGTTAAAAAACTGCCCGAAATTTTCCTACATGGGGAAAAGGATGGAAAGATCTGGATGTGGCACAGATGCCTGAAGTGTCCAAGAATGAATGGTTTTCCTCCCGCTACAAATAGAATAATAATGTCTGATGCTGCTTGGGGATTATCATTTGGGAAATTTTTGGAACTCAGTTTCTCGAACCATGCTGCAGCAAGCAGAGTGGCAGGCTGCGGTCACTCTTTACATAGGGATTGTCTTCGTTTTTATGGATTTGGGCATATGGTTGCTTGTTTTCGGTATGTATCAATCGAAATTCACTCGGTCTACCTTCCCCCATACAAACTCAAGTTTGATGATGAAAATCAAGAATGGATACAAAAGGAGTCAGATGAGGTGGTTAACCGAGCGGAGCTTTTATTTTCAGAGGTACAGAGTGCTCTTAGTCAGATTGAAGACAAAAGAACTAGCTCAATGCCAGTTAGTAGTGGACTTGTAACACCTGAATCTGGGAGCCAAGTTGCGGAACTAGAGGCCATGTTACGAAGGGAGAAAGATGAATTTGAGGAAGCACTTCATAAGATTTTAAACCAGGAAAAGAGAAAGGGCCGGCCTGGGGTTGACATTCTGGAAATTAATCGGTCGCGGAGGCAGTTATTTTTCCAATCATATATGTGGGACCACCGCCTTATCCATGTTGCCAGCTCAGCTAATTTTACAAACGAGAGTGATTTAAGCGGTTCAATTTCAGATGACAAGACGAGAACCACGGATGAAAAATTGAAAAGTGGGATGTCCATGCCAGGTTTCAGGAGTAGTGATTGCATTCTTATGGATCCGAAGCTTCTCGAAAGCCCTTATCTGGTCAGAGGAGGACATGGTAGCAAAATTTCCCAAGGTGATGATATATTTGATCAAGAAATTGACTGGGACAAAGACACAGAACATGAGAAAGAGGATGAACCTGACTCTTCAAATCTTGGGTTAGGCATTCGCAGATCTCTTTCTGAGGGGCATTATCAATCCATGTCTTACTGTTTGTCTGATACCCTTGATGCAAAATGGACAGGTGAGGATTCAGGGTTTGAAATCCTAAAGGATAACAATTCTGTAAATCTTGATGAGTTTATGGCAGATTTGAGCACCGCTATACAAAGAGACATGTCAAATCAAGGGAATCATGCAGAAGACAAGAATGTTGTCAAGAATATGCCGAAAGGACATGATACTATGGAAGACTCTTTAAGCTGGCTAGGAATGCCGTTCATAAACTTCTATCGCTCATTTAACAAGAACTCTCTAGCCAGTTCCCAGAAGTTTGATACACTAGCAGACTACAATCCTGTGTATGTATCTTCCTTATCTTCCTTTCGGGAGATGGAACTACAAGGCGAAGCAAGGCTGCTTCTTCCGATTGGAGTTAATGAGACTGTAATACCACTGTTTGATGATGAGCCCTCGAGTATCATATCGTATGCACTAATGTCACCAGAATATCATGCACAGCTGATTGATGAAGGAGAAAGAACAAAAGATGGAGTTGAAACAATGCCTTCATTGTATTTGTCTGACTCGGGAAATTTCCAGTCGTTCCTTTCTGCTAATGAAACAACTTCTGATTCTCAGATAAGTTTTTTCTCAACAGATGATACGTTACCATCCTTTTCTGCCTCACGTAGCACATGGGTAGGAGATCCACTGGTATGTACAAAGGCCATGCATCCCAGAGTTTCCTTTGGAGATGATGGTCTCCATAGTAAGGTCAAATATTCTGTGACTGTTTACTATGCCAAGCTGTTTGAAGCCTTAAGAAGGACCTCTTGTCCTTCCGAACTTGACTATGTACGGTCCTTGAGTCGCTGTAGAAAATGGGGAGCTCAAGGTGGCAAGAGTAACGTATTCTTTGCAAAAACCTTGGACGATCGATTTATCATCAAACAAGTCACCAAAACAGAGCTTGAATCCTTTATTAAATTTGGTCCTGATTACTTCAAGTACCTTTCTGATTCAATATACCAGGTGGGAGGTCCAACATGCTTGGCAAAGATTCTAGGAATATACCAGGTTACAGTAAAGCATCCTAAGGGGGGGAAAGAATCAAGGATAGATGTCTTGGTTATGGAGAATCTTCTGTTTGGGAGGAATGTGAAACGACTTTATGATCTCAAAGGATCTTCCAGGTCTCGCTATAATTCGGACTCTACTGGGAGCAACAAAGTTCTGCTGGACCAGAACTTGATTGAATCAATACCAACTTCTCCCATTTTTGTGGGAAATAAGGCAAAACGGTTGCTAGAGAGAGCTGTCTGGAATGATACTTCTTTTCTTGCTTCGGTCGGCGTAATGGACTATTCATTACTTCTTGGGATGGATGAAGAGAAGCATGAGTTGGTGATTGGAATCATTGATTACATGAGGCAGTATACATGGGACAAGCATTTGGAAACGTGGGTAAAAGCTGCTGGCATCCTTGGAGGCCCCAAGAATGCAGCTCCAACGGTAATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGAGCAGTTATTTTTACATGCTTCCGGATCAGTGGTCTCTTCCACCTAAATCCCAGTCTGATTTATTTGAAGAGAACACACCGTCTACTTCAGTTGAATAA 5463 0.425 MVARRRTFSEVVSIVKSWIPWPPQSESTNVSRVFWMAKNSCTVCYGCDSLFNLTNRRHHCRHCGKIFCASCTSNLAPALSSDQRNLSDERDKVRVCNFCYKQWKQGLASCNSNNQVLSLDHSSSASTSSFISTKSVVTANSSNNIVCSLPVSVGCYQQGQQSGVSLHRSSMKLESLDREILSALRRDLVASLGNSSLKQYEYSMKGSGDEEDDYSVYQSASEMRHYSGVGGYYGQADFDGINDIDGSQVHPDEDNINTGVLCNSFEHQYFDMRGLDEIPAIIKNEDEPDMFDENEAPSSLYVSADIDAEPLDFENNGLLWLPPEPEDEEYEREDMLFDNEDDYYGNDIGEWGYAHSPSSFESGEDPNRDSSCEEQRMGTSNVVDEHFRALVAQLLLVENLPVEENDNNSWFEIITSLSWEAARLLKPDTSQSGGMDPGGYVKVKCIACGSRSESVVVKGVVCKKNVAHRRMRSKVDRPRLLILGGALEYQRVTNLLTSVDTLLQQEMEHLKMAVAKIATQQPDILLVEKSVSRYAQEYLLAQGISLVLNVKMSFLERIARCTETQIAPSVDHLSSLKLGSCETFRVEKFIEDLGSAGHEGKKSAKTLMFFEGCPKPLGFTILLRGADKDELKKVKHVVQYGVFAAYHLAMETSFLADEGASQTECPLNGPIPVPIPEKSPVIERSISTVPGYPIPGSEKSLGPELGTELQRAKSISIAELASLIGGKETSLSYAPYSSMPPGSSYSNSTTFYPSSFPSSTSMSYYEKPLTSEDINKMESKISLMSGTSVMNCSLEIMDNHPSPSVNEYWTSDKFAHHIQTDTPQNSLSQMSTTLSALKLSPLEVGQSHSKETEAVNEEQLLAEEVFPPSPTDHQSILVSMSSRCVWKGTVCERPHIFRIAYYGTFDKPLGRFLRDCLLDQSYQCNFCEMPSEAHVHCYTHRQGTITISVKKLPEIFLHGEKDGKIWMWHRCLKCPRMNGFPPATNRIIMSDAAWGLSFGKFLELSFSNHAAASRVAGCGHSLHRDCLRFYGFGHMVACFRYVSIEIHSVYLPPYKLKFDDENQEWIQKESDEVVNRAELLFSEVQSALSQIEDKRTSSMPVSSGLVTPESGSQVAELEAMLRREKDEFEEALHKILNQEKRKGRPGVDILEINRSRRQLFFQSYMWDHRLIHVASSANFTNESDLSGSISDDKTRTTDEKLKSGMSMPGFRSSDCILMDPKLLESPYLVRGGHGSKISQGDDIFDQEIDWDKDTEHEKEDEPDSSNLGLGIRRSLSEGHYQSMSYCLSDTLDAKWTGEDSGFEILKDNNSVNLDEFMADLSTAIQRDMSNQGNHAEDKNVVKNMPKGHDTMEDSLSWLGMPFINFYRSFNKNSLASSQKFDTLADYNPVYVSSLSSFREMELQGEARLLLPIGVNETVIPLFDDEPSSIISYALMSPEYHAQLIDEGERTKDGVETMPSLYLSDSGNFQSFLSANETTSDSQISFFSTDDTLPSFSASRSTWVGDPLVCTKAMHPRVSFGDDGLHSKVKYSVTVYYAKLFEALRRTSCPSELDYVRSLSRCRKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPDYFKYLSDSIYQVGGPTCLAKILGIYQVTVKHPKGGKESRIDVLVMENLLFGRNVKRLYDLKGSSRSRYNSDSTGSNKVLLDQNLIESIPTSPIFVGNKAKRLLERAVWNDTSFLASVGVMDYSLLLGMDEEKHELVIGIIDYMRQYTWDKHLETWVKAAGILGGPKNAAPTVISPKQYKKRFRKAMSSYFYMLPDQWSLPPKSQSDLFEENTPSTSVE 1820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2339 1820 Coils Coil 1114 1141 - -
Prci12g2339 1820 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1508 1649 IPR027484 -
Prci12g2339 1820 MobiDBLite consensus disorder prediction 1182 1205 - -
Prci12g2339 1820 SUPERFAMILY SAICAR synthase-like 1521 1792 - -
Prci12g2339 1820 SMART fyve_4 30 105 IPR000306 GO:0046872
Prci12g2339 1820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 108 IPR013083 -
Prci12g2339 1820 CDD Fab1_TCP 388 659 - -
Prci12g2339 1820 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1804 - -
Prci12g2339 1820 CDD PIPKc_PIKfyve 1528 1792 IPR044769 GO:0000285
Prci12g2339 1820 Gene3D - 1652 1793 - -
Prci12g2339 1820 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 26 111 - -
Prci12g2339 1820 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1467 1792 IPR002498 GO:0016307|GO:0046488
Prci12g2339 1820 FunFam Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family 1474 1649 - -
Prci12g2339 1820 SMART PIPK_2 1501 1793 IPR002498 GO:0016307|GO:0046488
Prci12g2339 1820 SUPERFAMILY FYVE/PHD zinc finger 34 107 IPR011011 -
Prci12g2339 1820 MobiDBLite consensus disorder prediction 354 376 - -
Prci12g2339 1820 SUPERFAMILY GroEL apical domain-like 453 625 IPR027409 -
Prci12g2339 1820 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 38 104 IPR017455 -
Prci12g2339 1820 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 452 625 - -
Prci12g2339 1820 Pfam FYVE zinc finger 35 103 IPR000306 GO:0046872
Prci12g2339 1820 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1651 1793 - -
Prci12g2339 1820 Gene3D GroEL 452 625 IPR027409 -
Prci12g2339 1820 Pfam TCP-1/cpn60 chaperonin family 408 660 IPR002423 GO:0005524
Prci12g2339 1820 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1567 1734 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2339 Prci-Chr12 41130024 41139612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2339 6 1814 EF-hand Containing Proteins AT3G14270 54.501 0.0 1797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2339 K00921 - gmx:100777340 2239.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2339 12 41130024 41139612 Prci12g2339 12 41130024 41139612 ECH