Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2270 ATGACGGTGTCTACTATAGCTTTATGTGCTAGCCCACCGAGCAGTGTGTGCTCCACTGCGCACCCTTGCCATATCAACACCTATGCATCATACGATTTCGACTTGGGTTCGCGATCGTCCTCATCGTCGTCTTCCACGACGGCGTCCACATCTCAGAAACCGGGAATGAGTGGCCTCTCGTGCTTATTCTCCTCGCCGACGGTGAAGCCCGTTCCTTTGTCGAGCTTTTCCGGTGGCGGAGAGGAATTGGGTTCTTTGTCTGAATTGAAGGAGCTGAGCAGCTCCTTTTCCTATTCGCCGAGCAAATTTGTTGGATCTTCTTGGAAAAGAGATCAGAGCCCCGTTTCGGTATTCCAAGGACCCGTTTCATGTAGTAGCAGTAGCGTTTCTGGTTCCGCAAGGAGTTCCCCAATGAGGATCGGAGGCGATAGCTCGATTCGATGTCGGGACAGTGGATTGTTAGATGGCTTTGTGAGAAATTCATTGGGTTCATGCTTGGATTACAATTCGCGAAGTTTCGAGTTTCGTGGTGGTGTCTTAGATTTGGGTTCTTCATCTTCCATAGCGGATGAACTGACCTTTAATTTGGAGGATTCTTTTGTCGGGGTAACTTTCGAGCCGTACGCTAGAGAATTGCTTGTGGGTGCCCAGTTGAAACACAAGATCTTTTGTGAAGAATTCGTCATTAAGGCTTTCTGCGAAGCCGAGAGAGCCCATAGAGGGCAGATGCGAGCTTCTGGTGATCCATATTTGCAGCATTGTGTTGAAACAGCTGTTCTGCTTGCTCTGATTGGTGCCAATTCCACAGTTGTGGCTGCAGGGCTTTTGCACGATTCACTTGATGACTCGTTTTTGACTTACGATTACATCTTTGGGGTTTTTGGCGCTGGGGTTGCTGATTTAGTTGAAGGGGTTTCTAAGCTAAGTCACTTGAGCAAGCTTGCACGAGAGAACAATACAGCCAGCAAGTCAGTTGAGGCGGATCGGCTGCATACCATGTTCCTTGCCATGGTTGATGCAAGAGCTGTTCTCATCAAATTGGCAGATCGCTTGCACAATATGATGACACTAGATGCTCTGCCAGTGGCCAAGCGGCAAAGGTTTGCGAAGGAGACCTTGGAGATTTTTGCACCTTTGGCCAATCGATTGGGAATATCTAGTTGGAAGGAGCAATTGGAGAACTTGTGTTTCAAGCATCTCAATCCAGAACAGCATCAGGAAATTTCTTCAAAGCTTGTGGAATCATTCGATGATGCAATGATCACTTCTGCTATAGAGAAATTAGAGCAAGCACTTAAAGATGAGGGAATTTCTTACCATGTCCTTTCTGGGCGGCACAAGAGCCTGTATAGCATTTATTGCAAAATGCTGAAGAAAAAGCTAACCATGAATGACATTCATGATATTTATGGGCTGCGCCTGATTGTTGACAAGGAGGAGGACTGTTATAAAGCCTTGACAGTTGTTCACTGGTTATGGTCTGAGGTACCTGGAAAGTTCAAAGACTACATTCAACATCCTAAGTTCAATGGGTATAAATCTCTGCATGCTGTTGTGATGGGTGAAGGCAAGCTTCCCCTTGAAGTACAAATCCGGACAAAAGAGATGCATCTGCAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGGTGATTGCCAGCATTCTTCATTTGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCATTGTGAGACAATGAATAAAGATTGTTCGGCTGTGGGATGTGCCGATTCAATCAAGCCGCCATGCAAGTTCCCTTCCCATGCTGATGATTGCCCACATTCTTACAAGCCCCATTGTGGTCAGGATGGCCCTGTGTTCATCATCTTGATCGAGAATGATAAGATGTCAGTCCAAGAGTTTCCTGCAAACTCGACGGTGATGGACTTGCTGGAAAGAGCTGGGCGAGGAAGCTCTAAATGGACCCCATACAGATTTCCATTGAAAGAAGAACTAAGGCCAAGACTGAACTATGACCCTGTGAGTGATCCCAAGTGTAAGTTGAATATGGGAGATGTGGTGGAGCTTACACCTGCCATACCTGACAAGTCTCTGACAGAATATAGGGAAGAAATCCAGCGTATGTATAATAGACAGTTAACTGTACCTGCACCTGCTTCAACTGGCATGGTTGGCTCAAGAAGCTGA 2187 0.4655 MTVSTIALCASPPSSVCSTAHPCHINTYASYDFDLGSRSSSSSSSTTASTSQKPGMSGLSCLFSSPTVKPVPLSSFSGGGEELGSLSELKELSSSFSYSPSKFVGSSWKRDQSPVSVFQGPVSCSSSSVSGSARSSPMRIGGDSSIRCRDSGLLDGFVRNSLGSCLDYNSRSFEFRGGVLDLGSSSSIADELTFNLEDSFVGVTFEPYARELLVGAQLKHKIFCEEFVIKAFCEAERAHRGQMRASGDPYLQHCVETAVLLALIGANSTVVAAGLLHDSLDDSFLTYDYIFGVFGAGVADLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLAMVDARAVLIKLADRLHNMMTLDALPVAKRQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPEQHQEISSKLVESFDDAMITSAIEKLEQALKDEGISYHVLSGRHKSLYSIYCKMLKKKLTMNDIHDIYGLRLIVDKEEDCYKALTVVHWLWSEVPGKFKDYIQHPKFNGYKSLHAVVMGEGKLPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVVTWHCETMNKDCSAVGCADSIKPPCKFPSHADDCPHSYKPHCGQDGPVFIILIENDKMSVQEFPANSTVMDLLERAGRGSSKWTPYRFPLKEELRPRLNYDPVSDPKCKLNMGDVVELTPAIPDKSLTEYREEIQRMYNRQLTVPAPASTGMVGSRS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2270 728 SUPERFAMILY HD-domain/PDEase-like 211 401 - -
Prci12g2270 728 CDD NT_Rel-Spo_like 424 542 IPR007685 GO:0015969
Prci12g2270 728 Gene3D Hypothetical protein af1432 215 401 - -
Prci12g2270 728 Pfam HD domain 235 385 - -
Prci12g2270 728 Pfam Region found in RelA / SpoT proteins 444 553 IPR007685 GO:0015969
Prci12g2270 728 CDD HDc 248 376 IPR003607 -
Prci12g2270 728 ProSiteProfiles HD domain profile. 250 354 IPR006674 -
Prci12g2270 728 SUPERFAMILY Nucleotidyltransferase 402 574 IPR043519 -
Prci12g2270 728 SMART hd_13 246 363 IPR003607 -
Prci12g2270 728 ProSiteProfiles S4 RNA-binding domain profile. 668 704 - -
Prci12g2270 728 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 109 696 - -
Prci12g2270 728 Gene3D Beta Polymerase, domain 2 404 534 IPR043519 -
Prci12g2270 728 SMART RelA_SpoT_2 444 554 IPR007685 GO:0015969
Prci12g2270 728 FunFam GTP pyrophosphokinase RelA 211 401 - -
Prci12g2270 728 FunFam GTP pyrophosphokinase RelA 402 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2270 Prci-Chr12 40400081 40403793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2270 243 553 EF-hand Containing Proteins AT3G17470 28.829 2.00e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2270 K00951 - qsa:O6P43_018406 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2270 12 40400081 40403793 Prci12g2270 12 40400081 40403793 ECH