Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2259 ATGGCTACCGATTCACCAGGCGACGTTCGCAAAGTGGTTGTTCATCTGAGAGCCACCGGTGATGCTCCTATACTCAAGCAAGCGAAATTTAAGATTGCTGGGACTGATAAATTTGCTAAAGTGATCGACTTTCTTCGCCGGCAACTCCACAGGGAGACACTGTTTGTGTATGTGAATAGTGCCTTCTCACCAAACCCAGACGAATCAGTTATTGACTTGTATAATAATTTTGGGATCGATGGCAAATTGGTGGTCAACTACGCATGTTCCATGGCATGGGGCTAA 285 0.4561 MATDSPGDVRKVVVHLRATGDAPILKQAKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDESVIDLYNNFGIDGKLVVNYACSMAWG 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2259 94 Pfam Ubiquitin-like autophagy protein Apg12 11 94 IPR007242 GO:0000045|GO:0005737
Prci12g2259 94 SUPERFAMILY Ubiquitin-like 10 93 IPR029071 -
Prci12g2259 94 CDD Ubl_ATG12 11 93 - -
Prci12g2259 94 Gene3D - 6 94 - -
Prci12g2259 94 FunFam Ubiquitin-like protein ATG12 5 94 - -
Prci12g2259 94 PANTHER AUTOPHAGY PROTEIN 12 7 94 IPR007242 GO:0000045|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2259 Prci-Chr12 40237110 40240754 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2259 K08336 - zju:107405578 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2259 12 40237110 40240754 Prci12g2259 12 40237110 40240754 ECH