Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2228 ATGTCTCTAATTCGTCGGAGAAAAGGCGGAGAAGCCGATAAGACTGCCAGTGCGGGGTTGAAGATTCAGAGCGAAAGGAAAGAAGAAAAAGAAGATGATGATAAAAAGAAGGCAGCGGCGAAGCAGAGCAAGAAGGCGGAGAAGAAGAGCAAATGGTCTTGCGTTGACAATTGTTGCTGGTTCATCGGTTGCATTTGTTCTGTGTGGTGGTTATTGCTGTTTCTGTACAAAGCTATGCCAGCTTCGTTCCCTCAGTATGTGACAGAGGCGATAACTGGACCGTTGCCTGATCCACCTGGTCTGAAACTGAAGAAAGAAGGGCTGACGGCAAAGCATCCGGTGATCTTCGTGCCGGGGATCGTCACCGGGGGCCTTGAGCTTTGGGAGGGTCACCAGTGTGCTGAGGGCTTGTTCCGGAAACGATTGTGGGGCGGTACATTTGGAGAAGTCTACAAAAGACCTTCATGCTGGGCAGAGCACATGTCACTGGACAACGAGACAGGATTAGATCCACCTGGTATTAGAGTCAGGCCTGTCTCTGGACTTGTGGCTGCTGATTACTTTGCTCCAGGGTATTTCGTTTGGGCTGTCCTAATAGCTAACTTGGCTCGCATTGGTTATGAAGAAAAAACCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACTGAGGTGCGAGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGAGGCAACAAGGCTGTTGTCATCCCACATTCCATGGGTGTGCTTTACTTTCTTCATTTTATGAAGTGGGCTGAAGCACCTGCTCCAATGGGCGGTGGAGGTGGACCAGATTGGTGTGCCAGACATATAAAGGCAGTGATGAACATCGGTGGACCATTTTTGGGTGTTCCGAAGTCCGTGGCTGGGCTTTTCTCTGCTGAAGCCAGGGATATTGCTGTTGCCAGGGCAATTGCACCAGGTTTCTTAGATAATGATCTGTTTCGCTTTCAAACCTTGCAACATGTAATGAAGATGACCCGCACTTGGGATTCAACAATGTCAATGGTACCAAGAGGTGGAGACACTATATGGGGTGGTCTTGACTGGTCACCAGAGGAATGCTATCTCCCTAGCAAGAAAAAGCAAAAACATAACGATACTCAATCGACAAGCCAGGACAATGATAACTCAACAATTTCTCAATCAAAACCTGTCAACTATGGGCGGATCATATCATTTGGCAAGGATGTGGCAGAAGCACCTTCTCTTGAGATAGAGAGGATTGACTTTCGGGTGAGGCTTTATGTTATAAAGAAAACCTTTGGCATAATTTCTGTTTTCTATGAGGATGCCATTAAGGGTCAAAATATTGGAAATACCACCTGTCGTGATGTATGGACTGAGTACCACGACATGGGAGTTGAGGGAGTCAGAGCTGTTGCTGAGTATAAAGTTTACACTGCTGGCTCTATTGTAGATCTGCTTAATTTTGTTGCTCCAAAAATGATGGCTCGTGGTAGTTCTCATTTCTCTTATGGAATTGCTGACAATTTGGATGATCCAAAATATGAGCACTACAAATATTGGTCAAACCCCTTGGAGACCAAATTACCAAATGCTCCTGATATGGAAATCTTTTCTTTATATGGGGTTGGCATACCAACTGAAAGAGCTTATGTTTACAAGTTATCTTCCTATGCTGAGTGTTACATTCCTTTTGAGATCGATACTTCAGCAGACGGGGATGATGAGGATAGCTGTCTGAAGGATGGAGTGTACACAGTTGATGGGGATGAGACAGTGCCTGCTCTAAGTGCAGGTTTCATGTGTGCTAAAGGTTGGCGTGGGAAAACCAGATTCAATCCTTATGGAATTCGTACTTACGTAAGGGAATATGATCATTCTCCTCCGGCCAACCTGCTCGAAGGCCGGGGCACGCAGAGTGGTGCTCATGTTGACATCATGGGAAATTTTGCATTGATTGAGGATATTATTAGGGTGGCTGCTGGGGCTACCGGAGAAGATCTGGGAGGTGATCAGGTATATTCAGATATCTTTAAGTGGTCTGAAAAAATTAAGTTGCCTCTGTAA 2091 0.4534 MSLIRRRKGGEADKTASAGLKIQSERKEEKEDDDKKKAAAKQSKKAEKKSKWSCVDNCCWFIGCICSVWWLLLFLYKAMPASFPQYVTEAITGPLPDPPGLKLKKEGLTAKHPVIFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWAEHMSLDNETGLDPPGIRVRPVSGLVAADYFAPGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQTLSRIKSNIELMVATNGGNKAVVIPHSMGVLYFLHFMKWAEAPAPMGGGGGPDWCARHIKAVMNIGGPFLGVPKSVAGLFSAEARDIAVARAIAPGFLDNDLFRFQTLQHVMKMTRTWDSTMSMVPRGGDTIWGGLDWSPEECYLPSKKKQKHNDTQSTSQDNDNSTISQSKPVNYGRIISFGKDVAEAPSLEIERIDFRVRLYVIKKTFGIISVFYEDAIKGQNIGNTTCRDVWTEYHDMGVEGVRAVAEYKVYTAGSIVDLLNFVAPKMMARGSSHFSYGIADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGIPTERAYVYKLSSYAECYIPFEIDTSADGDDEDSCLKDGVYTVDGDETVPALSAGFMCAKGWRGKTRFNPYGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDIIRVAAGATGEDLGGDQVYSDIFKWSEKIKLPL 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2228 696 Gene3D alpha/beta hydrolase 135 327 IPR029058 -
Prci12g2228 696 MobiDBLite consensus disorder prediction 1 42 - -
Prci12g2228 696 FunFam Phospholipid:diacylglycerol acyltransferase 1 158 346 - -
Prci12g2228 696 MobiDBLite consensus disorder prediction 378 402 - -
Prci12g2228 696 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 31 690 - -
Prci12g2228 696 Pfam Lecithin:cholesterol acyltransferase 495 656 IPR003386 GO:0006629|GO:0008374
Prci12g2228 696 Pfam Lecithin:cholesterol acyltransferase 138 390 IPR003386 GO:0006629|GO:0008374
Prci12g2228 696 SUPERFAMILY alpha/beta-Hydrolases 95 520 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2228 Prci-Chr12 39830993 39837236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2228 154 696 Acyl Lipid Metabolism Gene Families AT5G13640 76.059 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2228 K00679 - zju:107403549 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2228 12 39830993 39837236 Prci12g2228 12 39830993 39837236 ECH