Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2212 ATGAGCCTTCTTTATGAGGCAGCATATAGTGGGGATGTATCAATGCTTAATTCATTGATACAGCAACACTCACATATCTTGCATAAAACTTCACAAACTGCGTTCGCCGAAACTCCTTTACACATCTCATCTTTGCATGGCCACCTTCAATTCACAAAGAAACTTGTCACTCACAAACCCAATCTTGTCCTTGAGTTGGATTCCTCCCGAAAGACAGCCCTCCACTTGGCTTCTGCAGAGGGTCACTTTCTCATCGTAAAGGAATTGCTTAAAGCTAAAAACGAGCCATGCTTGTTTCCAGATGAAGAAGGAAGAATTCCTCTTCACTATGCTGCTATGAGAGGAAGGAAAGAGGTTGTGCAAGAGTTGATCAAAGCGAAGCCAGAGTCTCTGAGTTTTCATCACCAAGGAAAAACTGTATTTCACTTGTGTGTCACATACAACCATCTAGAGACTCTCAAAGTTTTGGTGGAATTGGAGTCTGCCATTACTGGCAAGCTTCTCAACTTCACGAGCTCGGATGATGCTGGAAACACCGTTCTTCATTTTGCTACCATGTTGAACCGAGTTGAGGTGATAAGCTATCTGGTGTCAATTCCGGAAATGAGAGAAATAGCAAACTTGAAGAACCAGATGGGCGTCACAGCCCAGGATATCGTGGAACAGAGTCCGATAAAAGACTTTAAAATCTGCGAAATACAACACATATTGACAAAGGCTGAAAAGGAAGGATTTGAAGCTGATCATCATCATCCACACCCACCACGACCATCATCTACTGATCACGTTGACCCTCCTCAGAATGTTTTGGATTGGGAAGAAATTTGTCAAGATAATCAACAAGTCAGGAACTTGGAGGAGAGAAAATCGATATTGCAGATTTGCACCTGCGCTTTTTAG 900 0.4267 MSLLYEAAYSGDVSMLNSLIQQHSHILHKTSQTAFAETPLHISSLHGHLQFTKKLVTHKPNLVLELDSSRKTALHLASAEGHFLIVKELLKAKNEPCLFPDEEGRIPLHYAAMRGRKEVVQELIKAKPESLSFHHQGKTVFHLCVTYNHLETLKVLVELESAITGKLLNFTSSDDAGNTVLHFATMLNRVEVISYLVSIPEMREIANLKNQMGVTAQDIVEQSPIKDFKICEIQHILTKAEKEGFEADHHHPHPPRPSSTDHVDPPQNVLDWEEICQDNQQVRNLEERKSILQICTCAF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2212 299 ProSiteProfiles Ankyrin repeat profile. 103 125 IPR002110 GO:0005515
Prci12g2212 299 ProSiteProfiles Ankyrin repeat region circular profile. 103 125 - -
Prci12g2212 299 SMART ANK_2a 69 98 IPR002110 GO:0005515
Prci12g2212 299 SMART ANK_2a 103 133 IPR002110 GO:0005515
Prci12g2212 299 SMART ANK_2a 136 165 IPR002110 GO:0005515
Prci12g2212 299 SMART ANK_2a 176 207 IPR002110 GO:0005515
Prci12g2212 299 SMART ANK_2a 35 64 IPR002110 GO:0005515
Prci12g2212 299 Gene3D - 2 231 IPR036770 -
Prci12g2212 299 PANTHER HOMEOBOX PROTEIN WARIAI 11 247 - -
Prci12g2212 299 SUPERFAMILY Ankyrin repeat 4 223 IPR036770 -
Prci12g2212 299 MobiDBLite consensus disorder prediction 245 266 - -
Prci12g2212 299 Pfam Ankyrin repeats (3 copies) 108 197 IPR002110 GO:0005515
Prci12g2212 299 Pfam Ankyrin repeats (3 copies) 4 92 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2212 Prci-Chr12 39739041 39741278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2212 11 220 Miscellaneous Gene Families AT4G10720 30.137 2.38e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2212 - - pcin:129289691 529.25