Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2210 ATGAAAATGGAAGCAACTGGCGATCGCTATGAAGGGAGAATGAGACTTCTATACGAGGCATCATACAGAGGGTGCGTTTCAACTTTGAACACCCTAATCCTGCAAGATCCTCTGATCTTGCACAGAATCAACTCGCGAACCATCTTTATGGAAACTCCCTTACACGTTTCAGCTTTGCTTGGCCACCTTGATTTCACAAAAGCCCTTCTTTCTCACAAACCCAAATTAGCCATTGAGTTGGACTCCTTCCAAAGCACACCTCTCCACTTAGCTTCTGCAGAAGGCCACATCGACATAGTGAAGCAGTTGTTGCAGTACTGTGATGATGCGTGCTTGGTTCTTGACCAAGAAGGGAGAATTCCCTTGCACTACGCTGTTATAAGAGGGAGATTTGAGGTTGTTGCAGAGCTTATTAGAGTAAAACCTGAGTCTTTGAGGATCCTTGACAAGGGTAAAACTATTTTCCACTTTTGTGTCACGTACAACCACTTGGAGATCCTCAAATCTTTGATTGAATTGGCTATTGGCGACACTTACGAGCTCCTCAATCAGAGAGACATGGATGGCAAGAACACCATTCTCCATTTGGCTGTTATGTCGAAGCAAGTTGAGACGGTGAGGTATCTCTTGTCAATTCCTGAAATAAGAGAACTGTCTAACATGGAGAACGGGATGGGTTATACGGTCCACGAAATTCTTGAGCAAATTCCGCAGGACTTGAAGAGCCTTGAAATACAAGTGATACTGATGAACTCTGGCATTAACAGTACCGAAAGGAGAGAAGTGAAGGATCGTGAAGGCCCAACAAGTACTAATGTCGGCCAAGGAATGAGACCTCGGAAGAAGTGGTGGAAAAATATTTTGAAGCACATGGGAAAATGGTTTAAGTATAACGGTGATTGGTTTAAGTCTTGTGGCTACTGTCATCTCGACCATAACCTTTCAAGCTGTAATCAATCCTCCAGGAGGCTTCATTCAACAAGCTTCATGAATTACAATACCATATCCTTCGTTGCATCTCTTGGCGTTACACTTTTGCTTGTGAGTGGAGTTCCTCTCAAGAATAAACTTGTGATGCGGATTTTATCAATAGGCATGATTATAACTCTCACGTCCCTTGCACTTGCCTACTCTTTTGCGCTCTACATGATAACCCCAGGCCTATATTATTGGAGTAAATCGACTTCCGATGTAAATGTCAAAGCCTACATTATTTGGATGGTTTTGCTTGGATTCATTGGTCTATACATCATAACCTACTTTTTCATATGGGCAGTCAAGACATGCATGAAGATGATCAAGCATCTGACGTCAATATGTCCAAGGAACAGAAACGAAAATGCCATTGGTTGA 1353 0.4265 MKMEATGDRYEGRMRLLYEASYRGCVSTLNTLILQDPLILHRINSRTIFMETPLHVSALLGHLDFTKALLSHKPKLAIELDSFQSTPLHLASAEGHIDIVKQLLQYCDDACLVLDQEGRIPLHYAVIRGRFEVVAELIRVKPESLRILDKGKTIFHFCVTYNHLEILKSLIELAIGDTYELLNQRDMDGKNTILHLAVMSKQVETVRYLLSIPEIRELSNMENGMGYTVHEILEQIPQDLKSLEIQVILMNSGINSTERREVKDREGPTSTNVGQGMRPRKKWWKNILKHMGKWFKYNGDWFKSCGYCHLDHNLSSCNQSSRRLHSTSFMNYNTISFVASLGVTLLLVSGVPLKNKLVMRILSIGMIITLTSLALAYSFALYMITPGLYYWSKSTSDVNVKAYIIWMVLLGFIGLYIITYFFIWAVKTCMKMIKHLTSICPRNRNENAIG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2210 450 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 17 266 - -
Prci12g2210 450 SUPERFAMILY Ankyrin repeat 12 230 IPR036770 -
Prci12g2210 450 ProSiteProfiles Ankyrin repeat region circular profile. 117 139 - -
Prci12g2210 450 ProSiteProfiles Ankyrin repeat profile. 117 139 IPR002110 GO:0005515
Prci12g2210 450 MobiDBLite consensus disorder prediction 258 277 - -
Prci12g2210 450 Gene3D - 3 234 IPR036770 -
Prci12g2210 450 SMART ANK_2a 150 180 IPR002110 GO:0005515
Prci12g2210 450 SMART ANK_2a 49 78 IPR002110 GO:0005515
Prci12g2210 450 SMART ANK_2a 189 217 IPR002110 GO:0005515
Prci12g2210 450 SMART ANK_2a 117 147 IPR002110 GO:0005515
Prci12g2210 450 SMART ANK_2a 83 112 IPR002110 GO:0005515
Prci12g2210 450 ProSiteProfiles Ankyrin repeat profile. 83 105 IPR002110 GO:0005515
Prci12g2210 450 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Prci12g2210 450 Pfam Ankyrin repeats (3 copies) 18 106 IPR002110 GO:0005515
Prci12g2210 450 Pfam Ankyrin repeats (3 copies) 122 210 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2210 Prci-Chr12 39720892 39725219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2210 20 233 Miscellaneous Gene Families AT4G10720 31.839 3.23e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2210 - - pcin:129289480 896.73