Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2204 ATGGAAACTCCCTTACACGTTTCAGCTTTGCTTGGCCACCTTGATTTCACAAAAGCCCTTCTTTCTCACAAACCCAAATTAGCCATTGAGTTGGACTCCTTCCAAAGCACACCTCTCCACTTAGCTTCTGCAGAAGGCCACATCGACATAGTGAAGCAGTTGTTGCAGTACTGTGATGATGCGTGCTTGGTTCTTGACCAAGAAGGGAGAATTCCCTTGCACTACGCTGTTATAAGAGGGAGACTCGAGGTTGTTGCAGAGCTTATTAGAGTAAAACCTGAGTCTTTGAGGATCCTTGACAAGGGTAAAACTATTTTCCACTTTTGTGTCACGCACAACCACTTGGAGATCCTCAAATCTTTGATTGAATTGGCTATTGGCGACACTTACGAGCTCCTCAATCAGAGAGACATGGATGGCAAGAACACCATTCTCCATTTGGCTGTTATGTCGAAGCAAGTTGAGACGGTGAGGTATCTCTTGTCAATTCCTGAAATAAGAGAACTGTCTAACATGGAGAACGGGATGGGTTATACGGTCCACGAAATTCTTGAGCAAATTCCGCAGGACTTGAAGAGCCTTGAAATACAAGTGATACTGATGAACTCTGGCATTAACAGTACCGAAAGGAGAGAAGTGAAGGATCGTGAAGGCCTAACAAGTACTAATGTCGGCCAAGGAATGAGACCTCGGAAGAAGTGGTGGAAAAATATTTTGAAGCACGTGGGAAAATGGTTTAAGTATAAGTTTAAGTATAACGGTGATTGGTTAGAAGACATGAGAGGGAATTTAAGTCTTGTGGCTACTGTCATCTCGACCATAACCTTTCAAGCTGTAATCAATCCTCCAGGAGGCTTCATTCAACAAGGTATTTTTAATAGTTCCAACACCACTTCCAGTTACGAGAATGCTTTAGGTATTAGACAAGGACCCCTCGGTTGCTTGCCACTTAGTAATGGCACTTATTTTGCATGTCCTGGGGAAGCGATACTTGCTTTTAAGCGTCCATCTTACTTTTACAGCTTCATGAATTACAATACCATATCCTTCGTTGCATCTCTTGGCGTTACACTTTTGCTTGTGAGTGGAGTTCCTCTCAAGAATAAACTTGTGATGCGGATTTTATCAATAGGCATGATTATAACTCTCACGTCCCTTGCACTTGCCTACTCTTTTGCGCTCTACATGATAACCCCAGGCCTATATTATTGGAGTAAATCGACTTCCGATGTAAATGTCAAAGCCTACATTATTTGGATGGTTTTGCTTGGATTCATTGGTCTATACATCATGACCTACTTTTTCATATGGGCAGTCAAGACATGCATGAAGATGATCAAGCATCTGACGTCAATATGTCCAAGGAACAGAAACGAAAATGCCATTGGTTGA 1392 0.4231 METPLHVSALLGHLDFTKALLSHKPKLAIELDSFQSTPLHLASAEGHIDIVKQLLQYCDDACLVLDQEGRIPLHYAVIRGRLEVVAELIRVKPESLRILDKGKTIFHFCVTHNHLEILKSLIELAIGDTYELLNQRDMDGKNTILHLAVMSKQVETVRYLLSIPEIRELSNMENGMGYTVHEILEQIPQDLKSLEIQVILMNSGINSTERREVKDREGLTSTNVGQGMRPRKKWWKNILKHVGKWFKYKFKYNGDWLEDMRGNLSLVATVISTITFQAVINPPGGFIQQGIFNSSNTTSSYENALGIRQGPLGCLPLSNGTYFACPGEAILAFKRPSYFYSFMNYNTISFVASLGVTLLLVSGVPLKNKLVMRILSIGMIITLTSLALAYSFALYMITPGLYYWSKSTSDVNVKAYIIWMVLLGFIGLYIMTYFFIWAVKTCMKMIKHLTSICPRNRNENAIG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2204 463 ProSiteProfiles Ankyrin repeat profile. 68 90 IPR002110 GO:0005515
Prci12g2204 463 SMART ANK_2a 34 63 IPR002110 GO:0005515
Prci12g2204 463 SMART ANK_2a 2 29 IPR002110 GO:0005515
Prci12g2204 463 SMART ANK_2a 140 168 IPR002110 GO:0005515
Prci12g2204 463 SMART ANK_2a 68 98 IPR002110 GO:0005515
Prci12g2204 463 SMART ANK_2a 101 131 IPR002110 GO:0005515
Prci12g2204 463 Pfam Domain of unknown function 326 396 IPR026961 -
Prci12g2204 463 Pfam Domain of unknown function 255 290 IPR026961 -
Prci12g2204 463 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 3 444 - -
Prci12g2204 463 ProSiteProfiles Ankyrin repeat region circular profile. 34 56 - -
Prci12g2204 463 Gene3D - 1 223 IPR036770 -
Prci12g2204 463 ProSiteProfiles Ankyrin repeat region circular profile. 68 90 - -
Prci12g2204 463 Pfam Ankyrin repeats (3 copies) 73 161 IPR002110 GO:0005515
Prci12g2204 463 Pfam Ankyrin repeats (3 copies) 2 57 IPR002110 GO:0005515
Prci12g2204 463 SUPERFAMILY Ankyrin repeat 3 163 IPR036770 -
Prci12g2204 463 ProSiteProfiles Ankyrin repeat profile. 34 56 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2204 Prci-Chr12 39646816 39651013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2204 1 302 Miscellaneous Gene Families AT4G10720 27.619 1.84e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2204 - - pcin:129289480 525.013