Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2184 ATGGCGGGTGAAGAAAAGTACTTCACGATCAAAGGGACCTTGGTCATCATCAACCTTAACGTCACTGCAGATTCTCAGTCCTTCACTATTGAGTTGATCAGTAGTGGTTCCAACCCAATACTTTCTGAGAGTGGAATGTTGAAAGTAGAAAATTCTGCATCTTCTGAAGGTATTAAACAAGAAGATGGAGCTTCAACTTATATTGTTTATTTCAATTGGAGACACGAGATGGGAATTCCAGGAGCCTTTATTATGAGGAACCTTCACCCCACTGATCAGTTCTTCCTTGTGAGTTTCACCATTGAAATCCCAAATCATTCTGCTCCAATAGACTTTGTTTGCAGATCTTGGGTTTACCCTGATACCAAATATAAAAGCCCTCGCATTTTCTTCGTCAACAAGCCATTTCTGCCAAGTGAGACACCAGAGGGATTGCTCCCTTATAGAAAACAGGAGCTGGAAGCAATAAGAGGAGACGGAACTGGAGAAAGAAAGGAATGGGATAGAATATATGATTATGCTACGTACAATGATTTGGGTAATATTGATAAAAGTGAGGATCTTGCTCGTCCAGTTCTTGGAGGATCCACTCAATATCCCTACCCTCGTAGGGTTAGAACTGGAAGGCCCCCATCAAATAAAGATCCTAACAGTGAGAGCAGACTTGGTGACGATCAAGCATTTACGATCTATGTTCCAAGAGATGATCGATTTGGAAACCAGAAGCTGTTTGAGTTTGTGCAATATTTTCCCAAATCTTCAATGAACCTTGTGAAGTCATATCTCTTAAAGGAATTGGAATCTAAGGAGAAAGAGTTTGGGAGCTTTAAGAGTGTTTTTGAAGTGCTCTATGAAAATGGCTTCACATTTAATGTGCCCAAACTGTTGCTTGACACTATTGCTCAAAGACTCCCAATTCCAGAGCCACCAGCTGATGGCAACCTCTTATTAAAATTTCCAATTCCTACTGTCATTCAAGATAATTTAGATGGGTGGATGACTGATGAAGAATTTACACGAGAAATGCTTGCGGGTGTGAATCCAGGTTTAATCCGCCTTCTCGAGGTGTTCCCCATAGAATGCACACTAGATCGTAACATTTATGGTGATCATTCCAGTATGATAACACGTGAACACCTGGAGAAAAATATGCAAGGATGCACAATAGAAGAGGCACTTAATTGCAAGAGATTTTTCATATTGGATCACTATGATGCATTCATGCCATATCTGAGGAAGATAAATGAGAGTTCCACCAGAAAGGCTTATGCAAGCAGGACAGTCCTTTTCCTCCAAAACGATGGCACTTTGAAGCCACTGGCTATTGAGCTGAGTTTGCCTCACCCTGATGGAGATCAATTTGGTGCTGTGAGTAAAGTGTACTTGCCTGAATCCGAAGGTGTTGAGGCCGCCCTTTGGCAATTGGCTAAAGCTTATGTTGTTGTAAATGACTCAGGCTATCATCAACTTGTTAGTCACTGGCTAAATACTCATGCTGTGATGGAGCCATTTGTTATAGCTACACATCGATGTCTCAGTGCACTTCACCCAATTCACAAACTTGTTCACCCTCATTTCCATGACACCTTGTTTATCAATGCACTTGCTCGCCAAAACTTAATCTCTGCTGATGGAACCATAGAGACCGCATTCTTGCCCGCAAAATATTCCATGGAGATGTCCTCCGTGGTCTACGAGAATTGGAACTTTCTTGAGCAAGCATTGCCTGCTGATCTCATCAAGAGAGGAATGGCAACTGAGGATAAAGATTCACCTCATGGGCTTTGCCTGGTGATAAAGGACTACCCTTATGCTGCTGATGGACTAGACATATGGGATGCTATTAACAAATGGGTTTGTGACTATGTCTTCTTATATTATAATACAGATCATGCTATAAAGCATGACACTGAGCTTCAAGCTTGGTGGAAAGAGGTAGTCCAAGTGGGTCATGCTGACTTAAAGGATAAGCCATGGTGGCCTAAGATGGAGACACGTGAAGAGCTTATTGAATCTTGCACCATTATCATATGGATAGCTTCAGCTCTTCATGCAGCTGTGAACTTTGGACAATTTCCTTATGGAGGTTATATCCTAAATCGACCAACTCTTAGCAGAAGATTGATACCTGAAAAGGGAACTGCAGAATATGAAGAGCTTAAGAAGAACCCAGAACAGAGTTTCTTGAAAACAATCACACCAAAGTTTGAGACTCTTCTTGATCTCTCAATCATAGAGATTTTGTCTGGGCATACTAGTGATGAAGTCTATTTGGGAACGACGAGTAATCCTACTTGGACATCTGACGAAATGGCCTTGGAGTCTTTTAATGCATTTGGAAAGAAGCTGAAAGAGATAGAGGAAACAATTGAAAAGAGAAACAAAGATCCTGAATTGTTGAACCGGGTTGGGCCGGTGAACGTGCCATACACTCTTCTTTATCCTTCCAGTGAACCGGGGATGACAGGCAAGGGAATTCCCAACAGTATCTCCATATGA 2499 0.417 MAGEEKYFTIKGTLVIINLNVTADSQSFTIELISSGSNPILSESGMLKVENSASSEGIKQEDGASTYIVYFNWRHEMGIPGAFIMRNLHPTDQFFLVSFTIEIPNHSAPIDFVCRSWVYPDTKYKSPRIFFVNKPFLPSETPEGLLPYRKQELEAIRGDGTGERKEWDRIYDYATYNDLGNIDKSEDLARPVLGGSTQYPYPRRVRTGRPPSNKDPNSESRLGDDQAFTIYVPRDDRFGNQKLFEFVQYFPKSSMNLVKSYLLKELESKEKEFGSFKSVFEVLYENGFTFNVPKLLLDTIAQRLPIPEPPADGNLLLKFPIPTVIQDNLDGWMTDEEFTREMLAGVNPGLIRLLEVFPIECTLDRNIYGDHSSMITREHLEKNMQGCTIEEALNCKRFFILDHYDAFMPYLRKINESSTRKAYASRTVLFLQNDGTLKPLAIELSLPHPDGDQFGAVSKVYLPESEGVEAALWQLAKAYVVVNDSGYHQLVSHWLNTHAVMEPFVIATHRCLSALHPIHKLVHPHFHDTLFINALARQNLISADGTIETAFLPAKYSMEMSSVVYENWNFLEQALPADLIKRGMATEDKDSPHGLCLVIKDYPYAADGLDIWDAINKWVCDYVFLYYNTDHAIKHDTELQAWWKEVVQVGHADLKDKPWWPKMETREELIESCTIIIWIASALHAAVNFGQFPYGGYILNRPTLSRRLIPEKGTAEYEELKKNPEQSFLKTITPKFETLLDLSIIEILSGHTSDEVYLGTTSNPTWTSDEMALESFNAFGKKLKEIEETIEKRNKDPELLNRVGPVNVPYTLLYPSSEPGMTGKGIPNSISI 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2184 832 FunFam Lipoxygenase 331 465 - -
Prci12g2184 832 FunFam Lipoxygenase 467 831 - -
Prci12g2184 832 Gene3D - 242 329 IPR027433 -
Prci12g2184 832 Pfam Lipoxygenase 145 815 IPR013819 GO:0016702|GO:0046872
Prci12g2184 832 Pfam PLAT/LH2 domain 61 131 IPR001024 GO:0005515
Prci12g2184 832 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 135 832 IPR013819 GO:0016702|GO:0046872
Prci12g2184 832 Gene3D - 330 465 - -
Prci12g2184 832 MobiDBLite consensus disorder prediction 191 226 - -
Prci12g2184 832 SUPERFAMILY Lipoxigenase 137 832 IPR036226 -
Prci12g2184 832 ProSitePatterns Lipoxygenases iron-binding region signature 2. 515 525 IPR020834 GO:0016702|GO:0046872
Prci12g2184 832 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 24 136 IPR036392 GO:0005515
Prci12g2184 832 PRINTS Plant lipoxygenase signature 167 183 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 356 375 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 745 759 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 128 149 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 200 219 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 317 333 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 423 447 IPR001246 GO:0016491
Prci12g2184 832 PRINTS Plant lipoxygenase signature 102 120 IPR001246 GO:0016491
Prci12g2184 832 FunFam Lipoxygenase 137 241 - -
Prci12g2184 832 Gene3D - 466 831 - -
Prci12g2184 832 PRINTS Lipoxygenase signature 470 487 IPR013819 GO:0016702|GO:0046872
Prci12g2184 832 PRINTS Lipoxygenase signature 488 505 IPR013819 GO:0016702|GO:0046872
Prci12g2184 832 PRINTS Lipoxygenase signature 508 528 IPR013819 GO:0016702|GO:0046872
Prci12g2184 832 ProSitePatterns Lipoxygenases iron-binding region signature 1. 488 502 IPR020833 GO:0016702|GO:0046872
Prci12g2184 832 Gene3D PLAT/LH2 domain 9 136 - -
Prci12g2184 832 Gene3D - 137 241 - -
Prci12g2184 832 ProSiteProfiles PLAT domain profile. 10 132 IPR001024 GO:0005515
Prci12g2184 832 SMART LH2_4 8 133 IPR001024 GO:0005515
Prci12g2184 832 PANTHER LIPOXYGENASE 25 832 IPR000907 GO:0016702|GO:0034440|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2184 Prci-Chr12 39326329 39332835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2184 63 832 Acyl Lipid Metabolism Gene Families AT1G55020 56.242 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2184 K15718 - cave:132170278 965.296