Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2183 ATGACCACGTTCACGCCGACGGTAATTAACTACACCATGGTCGTCACCGGTCCTAAGCCTGACTTCCTCGTCATGGCCGGCCAATTTTTTGGTTCTAAAGAAGCTCTTCCTTGGTGGTGGACTACAGATAATGAAGATACTGCGGCGAAAAGCTCAGATGTAGTTGCAGAAGATCAGAAAAGCATGAAGAGGTATGAATGCCATGCACCGACGAAAGATGGTATGAGCAGATTGTCCAGCACCTTGGCAGATGACCAAGTATCACATGACCTTACTTTTGATTGGGTGGTAGAGAAGGGAATTCCGGAAGTATTTTCGATTTTGCTTCTTGATTTCGAGATATTCCTTGTGAGTCTCACTGTTCATCCCATTCCCAATCTCACTTCTGAGCCTCTTCATTTTATCTGCAACTCCTGGGTTGACACCTTCAACAACACTCAACTCACTCGTACTTTCTTCATCAACAAGTCATATCTGCCGAGTGAAACAACCGGAAAAGTGGGGTTTTACCGAGAAGTAGAGCTGAAACTTTTAAGGGGAGATCTGGATGAAACTGACGGAGTGCGCAAGGAATGGGATAGAATCTATGATTATGCTACCTATAATGATTTGGGTGATGTTGATACAAGTCCAGATCTTGCTCGTCCTACTCTTGGAGGATCCGCTGAATATCCATACCCACGCAGGTTAAGAACTGGAAGGCCCCCATCACAAAATGATCCGAGCACTGAGAGCAGGCTGCCTGCAGAAGAAGCCTTTAATATCTATGTTCCTAAAGATGATCGATTTGGAACCCAGAAGTTGTATGAGTTTGTGCAGCATTTTCCCAAATCATCAATGAACCTCGTTAAGTCATATGTGTCAGCGGAATTGGAGGCCTCAGGAAAAGAGTTTGAGAGCTTTGAACAAGTGGTTAAAATTCTGTACAAAGATGGTTTCACTTTTAATGTACCTAAAGAGATTCTTGATGCTATTGCCGAGAGGCTACCTATACCAACGCCCCCAGAAAATGGTGATCTGCAATTGTTGTTTCCAATTCCTGGTGTCATTCAAGATAATTTAGATGGATGGATGACGGATGAAGAATTTGCACGAGAGATGCTTGCCGGTGTGAATCCTGTTTTAATCCGCCTACTTCAGGAGTTCCCCATAAAAAGCGCGCTAGATATTAATCTCTATGGTGACCATACATCTAGCATAAAAAGAGAACACTTGGAGAAGAACATGAATGGGCTCACAGTTTATGAGGCACTTGATGGCAAGAGATTTTTCATACTAGATCATTATGATGCATTCATGCTATATTTGAGGAAAATAAACGAAACTTCAAGAAAGGCATATGCAAGCAGGACAATCCTTTTCCTCCAAAACGATGGCACTTTGAAGCCATTAGCTATTGAGCTGAGTTTACCTCACCCTGATGGAGATCAATTTGGTCCAATCAGTAAAGTTTATGTGCCTGAAACTGAAGGTGTTGAGGGTACCATTTGGCAATTGGCTAAAGCTTATGTTGTTGTAAATGACACAGGCTATCATCAACTTGTCAGTCACTGGCTAAACACTCATGCTGTGATGGAGCCATTTGTGATAGCGACACACAGGCAACTCAGTCAACTTCACCCTATGCATAAGCTTCTTCACCCTCATTTTCATGACACCTTGTTTATCAATGCACTCGCTCGCCAAAACTTGATCTCTGCAGATGGAATTATAGAGACCTCATTCTTGCCTGGAAAATATGCCATGGAGATGTCCTCTGTGGTTTACAAGAGTTGGAATTTTCTTGATCAAGCCTTACCTGCTGATCTCCTCAAGAGAGGAATGGCAGTAGAGGATCCAACCGCTCCTCATGGGCTTAGCCTTGTGATAAAAGACTACCCTTACGCTGTAGATGGACTGCTCATATGGGATGCTCTTAAGACTTGGGTTCATGACTACGTCTCTTACTACTACGAGAATGATGACATCATTAAGCAGGACCCTGAGCTGCAATCTTGGTGGAAAGAGCTAGTAGAAGTGGGTCATGGTGACCTAAAAGACAAGGACTGGTGGCCTAAGATGCAAACTCGTCAAGAACTGATTCACTCTTGCACTATTATCATATGGATAGCCTCGGCTCTCCATGCAGCTATCAACTTTGGACAGTACCCATATGGGGGTTATATCCTGAACCGTCCTACTCTCAGCAGAAGGTTGATGCCCGAGAAGGGAACTCCAGAATATGAAGAGATGGTGAAGAATCCACAGCTAGCTTTCTTGCAAACAATCACACCAAAATTTGAGACTCTTCTTGATCTTTCAATTATAGAGATACTGTCAGGGCATACCACTGATGAGGTCTATCTTGGGACAAGGACTATTCCTTATTGGACATCTGATGTGAAGGTGTTGGAGGCTTTCAAGAAATTTGGAGATAGATTGGTAGAGATTGAGAAGGTATTGATAAGGAGGAATGAAGATGGGACACTAAAGAATAGGGTTGGGCCAGTGATGATGCCCTACACTCTGCTCTATCCTAGCAGTGAACCAGGACTCACGGGCAGAGGAATTCCAAATAGTATATCTATATGA 2571 0.4337 MTTFTPTVINYTMVVTGPKPDFLVMAGQFFGSKEALPWWWTTDNEDTAAKSSDVVAEDQKSMKRYECHAPTKDGMSRLSSTLADDQVSHDLTFDWVVEKGIPEVFSILLLDFEIFLVSLTVHPIPNLTSEPLHFICNSWVDTFNNTQLTRTFFINKSYLPSETTGKVGFYREVELKLLRGDLDETDGVRKEWDRIYDYATYNDLGDVDTSPDLARPTLGGSAEYPYPRRLRTGRPPSQNDPSTESRLPAEEAFNIYVPKDDRFGTQKLYEFVQHFPKSSMNLVKSYVSAELEASGKEFESFEQVVKILYKDGFTFNVPKEILDAIAERLPIPTPPENGDLQLLFPIPGVIQDNLDGWMTDEEFAREMLAGVNPVLIRLLQEFPIKSALDINLYGDHTSSIKREHLEKNMNGLTVYEALDGKRFFILDHYDAFMLYLRKINETSRKAYASRTILFLQNDGTLKPLAIELSLPHPDGDQFGPISKVYVPETEGVEGTIWQLAKAYVVVNDTGYHQLVSHWLNTHAVMEPFVIATHRQLSQLHPMHKLLHPHFHDTLFINALARQNLISADGIIETSFLPGKYAMEMSSVVYKSWNFLDQALPADLLKRGMAVEDPTAPHGLSLVIKDYPYAVDGLLIWDALKTWVHDYVSYYYENDDIIKQDPELQSWWKELVEVGHGDLKDKDWWPKMQTRQELIHSCTIIIWIASALHAAINFGQYPYGGYILNRPTLSRRLMPEKGTPEYEEMVKNPQLAFLQTITPKFETLLDLSIIEILSGHTTDEVYLGTRTIPYWTSDVKVLEAFKKFGDRLVEIEKVLIRRNEDGTLKNRVGPVMMPYTLLYPSSEPGLTGRGIPNSISI 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2183 856 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 157 856 IPR013819 GO:0016702|GO:0046872
Prci12g2183 856 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 78 158 IPR036392 GO:0005515
Prci12g2183 856 PRINTS Lipoxygenase signature 494 511 IPR013819 GO:0016702|GO:0046872
Prci12g2183 856 PRINTS Lipoxygenase signature 532 552 IPR013819 GO:0016702|GO:0046872
Prci12g2183 856 PRINTS Lipoxygenase signature 512 529 IPR013819 GO:0016702|GO:0046872
Prci12g2183 856 SUPERFAMILY Lipoxigenase 159 856 IPR036226 -
Prci12g2183 856 Gene3D - 159 265 - -
Prci12g2183 856 Gene3D - 490 855 - -
Prci12g2183 856 PANTHER LIPOXYGENASE 78 856 IPR000907 GO:0016702|GO:0034440|GO:0046872
Prci12g2183 856 ProSitePatterns Lipoxygenases iron-binding region signature 1. 512 526 IPR020833 GO:0016702|GO:0046872
Prci12g2183 856 Gene3D - 355 489 - -
Prci12g2183 856 Gene3D - 267 354 IPR027433 -
Prci12g2183 856 FunFam Lipoxygenase 491 855 - -
Prci12g2183 856 Pfam Lipoxygenase 170 839 IPR013819 GO:0016702|GO:0046872
Prci12g2183 856 MobiDBLite consensus disorder prediction 210 247 - -
Prci12g2183 856 FunFam Lipoxygenase 356 489 - -
Prci12g2183 856 ProSitePatterns Lipoxygenases iron-binding region signature 2. 539 549 IPR020834 GO:0016702|GO:0046872
Prci12g2183 856 Gene3D PLAT/LH2 domain 51 158 - -
Prci12g2183 856 PRINTS Plant lipoxygenase signature 769 783 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 192 208 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 447 471 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 150 171 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 381 400 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 225 244 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 342 358 IPR001246 GO:0016491
Prci12g2183 856 PRINTS Plant lipoxygenase signature 124 142 IPR001246 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2183 Prci-Chr12 39287000 39293234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2183 51 856 Acyl Lipid Metabolism Gene Families AT1G55020 54.736 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2183 K15718 - mnt:21384383 939.488