Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2152 ATGGCGTCTCATGGCTTATGCCCATCGGTAAAGAACATTCTTCTTCTAGATTCTGAAGGGAAGCGTGTAGCAGTCAAGTACTATTCAGATGACTGGCCAACAAACAATGCAAAATTGGCTTTTGAGAAGTTAGTATTCAATAAGACTGTGAAGACAAATGCTCGGACAGAAGCTGAGGTAACATTAATTGAGAATAATGTCGTTATATACAAGTTTGTTCAAGACTTGCATTTCTTTGTCACTGGTGGTGATGATGAAAATGAGCTCATTTTGGCTTCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCTATTTGTTGAGGAGCAATGTTGACAAAAGGGAGGCGCTTGAGAACTTGGATCTCATCCTTTTATGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGATCCCTCATTGCTGAAAAGGTGACCTCTCATAGCATTGATGCTGACGCCCCCTTATCTGAACAGACATTAACTCAAGCATGGGCTACGGCTAGAGAGCATTTGACAAGAACCCTTCTGAAATGA 543 0.4107 MASHGLCPSVKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKLVFNKTVKTNARTEAEVTLIENNVVIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTYLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGSLIAEKVTSHSIDADAPLSEQTLTQAWATAREHLTRTLLK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2152 180 PANTHER ZETA-COAT PROTEIN 7 179 IPR039652 GO:0006890|GO:0030126
Prci12g2152 180 CDD Zeta-COP 11 146 - -
Prci12g2152 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Prci12g2152 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Prci12g2152 180 FunFam Coatomer subunit zeta-2 4 150 - -
Prci12g2152 180 Gene3D - 5 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2152 Prci-Chr12 38948050 38950631 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2152 K20472 - gmx:100775726 326.25