LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci12g2090	ATGTTGCTTCCAGCCACAGGAGTAGGGATGAATTCTGCAATGGATGATATGAATTTGATTCAGCAAGCGCAGAGGCATCATTTGGTTGTGAGGGAGATAGGTGAAGAGATTGATTTAGAAATTGGACCTGGGGATGATGATCCTTCTTTTGGTAATGCAACTCTAATTGGTGCTCCTCCAAGAGAATCTTCTGCTGAAGAGCATGGTGAGAGCAAGCAAATGGGGATGGGTTCTCAGCTTCCTAATGATGATCAGGAGATGTCAAAGACACAACCTGTGAAGAGGAAGAAGAAGGTTGTGAAAAGATGGAGGGAGGAGTGGGCAGACACCTACAAATGGGCCTATGTTGATGTAAAAGATGGGACAGCAAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGCAGAAAGCATAGAAGAAACCCTTATGGAAATGAGGGCAGTAGGAATATGCAAATGAGTGCCTTAGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTCCAAATGGCCTCCAAGGATAAAATTATTGTCGACAAGCCCATTTATGTCAAAGCTCTTATGTCAAAAACAGCGGGATCAATTGTTGAAGCTGCACTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGTCAGTCCAGGAAGTAGTTCATGCTCTTGAAAGAGTAATTGCCAAAAATTCACATTATGTCAGCATCATGGAGCGCTTGTTGGAACCAGAACGCATGATTATTTTCAGAGTTCCGTGGGTTGATGATAGGGGTGAGACCCATGTTAACCGGGGTTTTCGGGTACAATATAACCAGTCCCTGGGTCCATGCAGGGGTGGTATTCGTTTTCATCCGTCAATGAATTTAAGTATTGCTAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCTTACAAATTAGGAGGGGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGGCCATGCGCTTCTGCCAAAGCTATATGAATGAGATGTATCGATACTTTGGTCCTGACAAGGACCTTCCATCAGAGGAGATGGGTGTTGGTACTCGAGAAATGGGATATCTCTTTGGACAGTATAGACGACTAGCTGGTCATTTTCAGGGAAGTTTCACAGGGCCGAGGATATTTTGGTCTGGCTCTAGTCTTCGAACTGAAGCTACTGGCTATGGCCTGGTTTTCTTTGCTCAGCTTATACTCGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTCATAAGCGGTTCTGGAAAGATTGCATTGCATGTTTTAGAGAAGTTGATTGCTTATGGGGCTCTTCCCATCACAGTTTCAGATTCAAGAGGATATTTGGTTGATGAGGATGGATTTGATTACATGAAAGTCTCTTTCTTGAGAGATATCAAAGCTCAACAGAGGAGTCTGAGAGACTATTCAAAGACCTATGCTCGATCCAAATATTATGATGAAGCGAAACCCTGGAATGAAAGGTGTGATATTGCATTTGCTTGTGCTTCCCAGAATGAAATTGATCAGTCTGATGCAATCAATTTGGTTAATTCAGGATGTCGTATGCTAGTAGAAGGTTCAAGCATGCCCTGTACACCTGAGGCAGTTGATGTTCTGAGGAAAGCTAATGTTCTCATTGCTCCTGCTATGGCTGCCGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAATTAAATCATCAGTGCAATTTGATGCACTGGTCACCAGAGGATTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAAAGAGCCATCAAAGCAGCTTCTGATTTTGGTTATCAAAAAGAAAGTCCCGAGGCTTTAGTGCATGGAGCTGTTATTTCTGCATTTCTGACCATTGCTCAAGCCATGACTGATCAAGGATGTGTATAG	1914	0.4269	MLLPATGVGMNSAMDDMNLIQQAQRHHLVVREIGEEIDLEIGPGDDDPSFGNATLIGAPPRESSAEEHGESKQMGMGSQLPNDDQEMSKTQPVKRKKKVVKRWREEWADTYKWAYVDVKDGTARIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIIVDKPIYVKALMSKTAGSIVEAALKRDPHEVEFIQSVQEVVHALERVIAKNSHYVSIMERLLEPERMIIFRVPWVDDRGETHVNRGFRVQYNQSLGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEAMRFCQSYMNEMYRYFGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVISGSGKIALHVLEKLIAYGALPITVSDSRGYLVDEDGFDYMKVSFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDIAFACASQNEIDQSDAINLVNSGCRMLVEGSSMPCTPEAVDVLRKANVLIAPAMAAGAGGVVAGELELNHQCNLMHWSPEDFESKLQEAMKQTYQRAIKAASDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV	637

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci12g2090	637	FunFam	NADP-specific glutamate dehydrogenase	196	239	-	-
	Prci12g2090	637	FunFam	NADP-specific glutamate dehydrogenase	567	637	-	-
	Prci12g2090	637	Gene3D	Leucine Dehydrogenase, chain A, domain 1	240	375	-	-
	Prci12g2090	637	PANTHER	NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED	142	637	-	-
	Prci12g2090	637	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	378	400	IPR006095	GO:0006520\|GO:0016491
	Prci12g2090	637	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	299	313	IPR006095	GO:0006520\|GO:0016491
	Prci12g2090	637	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	420	440	IPR006095	GO:0006520\|GO:0016491
	Prci12g2090	637	PRINTS	Glutamate/leucine/phenylalanine/valine dehydrogenase signature	557	568	IPR006095	GO:0006520\|GO:0016491
	Prci12g2090	637	Pfam	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase	388	635	IPR006096	GO:0006520\|GO:0016491
	Prci12g2090	637	Gene3D	-	394	559	-	-
	Prci12g2090	637	Pfam	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain	242	369	IPR006097	GO:0006520\|GO:0016491
	Prci12g2090	637	Gene3D	Glutamate Dehydrogenase, chain A, domain 3	565	637	-	-
	Prci12g2090	637	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	388	635	IPR036291	-
	Prci12g2090	637	SUPERFAMILY	Aminoacid dehydrogenase-like, N-terminal domain	197	381	IPR046346	-
	Prci12g2090	637	FunFam	Glutamate dehydrogenase	394	559	-	-
	Prci12g2090	637	MobiDBLite	consensus disorder prediction	57	96	-	-
	Prci12g2090	637	FunFam	Glutamate dehydrogenase	240	375	-	-
	Prci12g2090	637	Gene3D	Glutamate Dehydrogenase, chain A, domain 3	197	239	-	-
	Prci12g2090	637	SMART	ELFV_dehydrog_3	389	635	IPR006096	GO:0006520\|GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci12g2090	Prci-Chr12	38363566	38375327	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci12g2090	234	515	EF-hand Containing Proteins	AT5G07440	30.035	5.73e-31	121

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci12g2090	K00262		-	zju:107403966	1181.78

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci12g2090	12	38363566	38375327	Prci12g2090	12	38363566	38375327	ECH