Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2083 ATGGGTTTCTTCAATTGGGTCTGCTTGATCATCGTGTTTCATCTCTTTGCTGCAACACTCGTCTTATCAGATTTCTCCTTGAGTTCAGGCCATCCATTATCAGCAATTCCCATTGATTTTTTAGAATTTGCCAAAAAGCCAGAGGTTTTTGATTGGATGATTGAAATTCGAAGGAAGATTCATGAGAACCCTGAACTGGGTTATGAAGAATTTAAGACCAGTGAGCTGATAAGAGAGAAATTGGATAAATTGGGCATCTCTTATAAATACCCAGTTGCTGTTACTGGCGTTATTGGCTTCATAGGTACCGGTCGGCCTCCTTTTGTTGCATTAAGAGCCGATATGGATGCTCTTGCTATGCAGGAAATGGTGGAGTGGGAGCACAAAAGTAAAGTACCTGGAAAGATGCATGCTTGTGGACACGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAGCAAGAAAAAGAGATAAAAGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTGAGAAAGTTTTAAATGCTGGGGCTTTAGAAAATGTTGCTGCTATCTTTGGATTGCATATCACACGTACATTATCTATTGGCGAAGTGGCCTCTAGGCCTGGTCCCTTTTTGGCAGGAAGTGGCTTCTTCGAAGCAGTAATTAGTGGAAAGGGAGGCCATGCAGCCATTCCCCAACATACAATTGACCCGATATTGGCTGCTTCTAATGTTATTGTTAGCTTGCAACATCTTGTTTCTCGCGAAGCTGATCCTCTGGACTCTCAGGTTGTGACGGTAGCAAAATTTCAAGGAGGTGGTGCATTCAATGTTATTCCAGATTCAGTCACAATTGGGGGAACCTTCCGAGCTTTTTCAAAAGAAAGTTTCATGCAACTGAGACAGCGGATTGAGCAGGTTATTACTGGGCAGGCTGCCGTGCAGAGGTGCAATGCAACAGTTAGCTTTCTTGATAAAGAGAAATCCTTCTTCCCTCCAACTGTTAACGATGGTGACCTGCACAAGCATTTTCAACAAGTAGCTGGGGATTTGCTCGGGATTAATAAAGTTAAAGAAATGCAACCATTGATGGGATCTGAGGACTTCGCATTCTATCAAGAGAGTCTACCTGGTTACTTCTTCTTTCTTGGAATGGAAGACACTTCAATTGAACAGCTTGAATCAGCACATTCACCCCGTTTCAAAGTCAATGAAGATGCACTTCCTTATGGAGCTGCACTTCATGCGTCGTTAGCAGCTAGTTATCTTCTAAAGTTACAGCAGAATGTGCCTGTGGTAGAAGGTAATTATCATGATGAATTATAA 1341 0.428 MGFFNWVCLIIVFHLFAATLVLSDFSLSSGHPLSAIPIDFLEFAKKPEVFDWMIEIRRKIHENPELGYEEFKTSELIREKLDKLGISYKYPVAVTGVIGFIGTGRPPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEQEKEIKGTVVLVFQPAEEGGGGAEKVLNAGALENVAAIFGLHITRTLSIGEVASRPGPFLAGSGFFEAVISGKGGHAAIPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATVSFLDKEKSFFPPTVNDGDLHKHFQQVAGDLLGINKVKEMQPLMGSEDFAFYQESLPGYFFFLGMEDTSIEQLESAHSPRFKVNEDALPYGAALHASLAASYLLKLQQNVPVVEGNYHDEL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2083 446 PANTHER PEPTIDASE M20 FAMILY MEMBER 34 435 IPR017439 GO:0016787
Prci12g2083 446 FunFam N-acetyldiaminopimelate deacetylase 218 336 - -
Prci12g2083 446 PIRSF Amidohydrol_AmhX 39 432 IPR017439 GO:0016787
Prci12g2083 446 Pfam Peptidase family M20/M25/M40 110 424 IPR002933 GO:0016787
Prci12g2083 446 Gene3D Zn peptidases 53 413 - -
Prci12g2083 446 SUPERFAMILY Bacterial exopeptidase dimerisation domain 218 337 IPR036264 -
Prci12g2083 446 CDD M20_IAA_Hyd 53 416 IPR044757 GO:0009850|GO:0016787
Prci12g2083 446 Gene3D - 218 336 - -
Prci12g2083 446 NCBIfam amidohydrolase 53 415 IPR017439 GO:0016787
Prci12g2083 446 SUPERFAMILY Zn-dependent exopeptidases 48 428 - -
Prci12g2083 446 Pfam Peptidase dimerisation domain 219 315 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2083 Prci-Chr12 38310312 38316183 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2083 K21604 - gmx:100794121 712.22