Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2057 ATGCAAAGCTCTGTCATGAGAGTCCTCAGAGCTGTCTTCACCACGAAGCTCCACCTGCTCTACCCCGTCAATCTCAAACGCCTTTCAGCTCCTTCTGTCGCTTCCTTTCGTTCCTTTCCAAACCCTCGATTTTCTCGTTACTCCCATTTCACAAGCAGTCATCAGATAGATTCGAGCCTTGGCATTGATACCTCAGAAGAACCCAAGACCAATTTAAAAGCCCATTCCGAAGAAAGAACAACTTGGTCGCGATACAGTCATTTACCTAAAGCCTCTAGTGATGGGCAGAATAATCGGTCCGACTCTGTGGATGAAGTTGAAAACTTCGGAAGCCAAAGGGCAAATGGGAGACTGAAGGAGGCGAGCTCAGTTCAAGGTACCGAACAGGATGGTGGTATTCGAAGGAGAGTTGGGATCAAGAAAAAGGAAAAAGGAAAAACCCATTGGGTTTGCACCAATTGTGGGTATACGACTGGGCAATGGTTCGGATTTTGCCGCTCGTGTAATAGTAATTCCACGATGAAAGAGTATCATGAAACGAAACTCAGTGATTCTGGCAAGGTTAGTGGCTTTTCAGTTTCAGAAAATGTCATGGGGTTGTGGCTCCCTCAGCAGGCAGGTGAATTGTGTCCTTTAAAATTGACGGACGTGAACCGTGGAGTTAATCATCAGGAGTGGAGAATTCCTTTCTCTGGTCCTTTTGGAAATGAAGTTTCCAGAGTACTTGGAGGTGGTCTTGTACCAGGCTCTTTGATTTTAGTTGGTGGTGATCCTGGTGTTGGGAAGAGTACACTTCTGTTGCAGATTGCTGCAATGATAGTAGAAGGGTGCAAAAGTGATGAAGCAGCTCCAGTTGTATACGTATCTGGTGAAGAGAGTATTGAGCAAATTGGTAACAGAGCAGATCGCCTTGGGATTGAATCAGAAATATATTTATACTCAAGTACTGATATCGAGGACATATTGAAGAAAACTCAGCATCTCTCTGCTCGAGCTGTAGTTGTTGATTCAATACAAACTGTTTATTTGAAAGGAATAGTTGGAAGTGCTGGTGGGATTTTCCAGGTGAAGGAATGTACTTCAGCTTTGCTGCGATATGCTAAGCAGACTAACACTTCAATTTTCGTGATTGGGCATGTAACAAAATCTGGAGATATAGCAGGACCCCGTGTATTGGAGCACATTGTTGATGTTGTTTTATATATGGAAGGCGAGAAATTCTCTTCCCATCGTATGCTTCGAGTGGTGAAAAATCGGTTTGGATCTGCTGATGAGCTTGGAGTCTTTGAGATGTCACAATCAGGTCTCCGGGCTGTTTCAAATGCCAGTGAAATATTTCTAAGTGAGCAACACTTAGATTCAGATTTTTTAGCTGGGTTAGCTATTGCTGTCATAATTGATGGGTCTCGAGCTTTCCTTGTTGAAATTCAGGCACTTTGTGTTACTGGCTCAACAGTCTCAAGGCATGTTAATGGCGTTCAACAAAGTAGAGCTGATATGATTATATCTGTTCTTATGAAGCAAGCTGGACTTCGACTTCAAGAAAATGCTGTGTTTTTAAATGTTGTTAGCGGCATTCGGCTGACTGAGACAGCTGGAGATCTGGCAATAGCAGCTGCAATTTGCAGCAGTTTCTTGGAATTCCCTCTTCCCAAGGGCATAGCATTCATTGGTGAAATTGGCCTTGCTGGTGAGCTCCGCATGGTTCCCAGATTGGATAAAAGGGTCAACACTCTGGCAAAACTGGGTTACAGAATGTGTGTTGTACCAAAAGAGGCAGAAAAAGTTTTAGGAACGGATGGTTTGGAGATGAAGATCGTAGGTTGCAAGAATCTGAAGGAGGTTATTAACACTGTTTTTAAAGAACAAGAATGA 1875 0.4336 MQSSVMRVLRAVFTTKLHLLYPVNLKRLSAPSVASFRSFPNPRFSRYSHFTSSHQIDSSLGIDTSEEPKTNLKAHSEERTTWSRYSHLPKASSDGQNNRSDSVDEVENFGSQRANGRLKEASSVQGTEQDGGIRRRVGIKKKEKGKTHWVCTNCGYTTGQWFGFCRSCNSNSTMKEYHETKLSDSGKVSGFSVSENVMGLWLPQQAGELCPLKLTDVNRGVNHQEWRIPFSGPFGNEVSRVLGGGLVPGSLILVGGDPGVGKSTLLLQIAAMIVEGCKSDEAAPVVYVSGEESIEQIGNRADRLGIESEIYLYSSTDIEDILKKTQHLSARAVVVDSIQTVYLKGIVGSAGGIFQVKECTSALLRYAKQTNTSIFVIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKFSSHRMLRVVKNRFGSADELGVFEMSQSGLRAVSNASEIFLSEQHLDSDFLAGLAIAVIIDGSRAFLVEIQALCVTGSTVSRHVNGVQQSRADMIISVLMKQAGLRLQENAVFLNVVSGIRLTETAGDLAIAAAICSSFLEFPLPKGIAFIGEIGLAGELRMVPRLDKRVNTLAKLGYRMCVVPKEAEKVLGTDGLEMKIVGCKNLKEVINTVFKEQE 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2057 624 PANTHER DNA REPAIR PROTEIN RADA 74 622 - -
Prci12g2057 624 Gene3D - 237 437 IPR027417 -
Prci12g2057 624 NCBIfam DNA repair protein RadA 144 615 IPR004504 GO:0003684|GO:0005524|GO:0006281
Prci12g2057 624 CDD RadA_SMS_N 149 439 - -
Prci12g2057 624 Gene3D - 458 624 IPR014721 -
Prci12g2057 624 PRINTS DNA repair protein radA signature 336 360 - -
Prci12g2057 624 PRINTS DNA repair protein radA signature 410 436 - -
Prci12g2057 624 PRINTS DNA repair protein radA signature 240 268 - -
Prci12g2057 624 PRINTS DNA repair protein radA signature 485 508 - -
Prci12g2057 624 PRINTS DNA repair protein radA signature 151 175 - -
Prci12g2057 624 PRINTS DNA repair protein radA signature 375 403 - -
Prci12g2057 624 Pfam AAA domain 241 384 - -
Prci12g2057 624 MobiDBLite consensus disorder prediction 58 136 - -
Prci12g2057 624 FunFam DNA repair protein RadA 226 437 - -
Prci12g2057 624 Pfam Subunit ChlI of Mg-chelatase 502 592 - -
Prci12g2057 624 FunFam DNA repair protein radA isogeny 455 623 - -
Prci12g2057 624 ProSiteProfiles RecA family profile 1. 227 380 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Prci12g2057 624 SMART AAA_5 248 406 IPR003593 GO:0016887
Prci12g2057 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 431 IPR027417 -
Prci12g2057 624 Pfam Rubredoxin metal binding domain 149 176 IPR041166 -
Prci12g2057 624 SUPERFAMILY Ribosomal protein S5 domain 2-like 417 621 IPR020568 -
Prci12g2057 624 MobiDBLite consensus disorder prediction 68 84 - -
Prci12g2057 624 MobiDBLite consensus disorder prediction 85 129 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2057 K04485 - qsa:O6P43_027696 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2057 12 38106059 38115205 Prci12g2057 12 38106059 38115205 ECH