Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2051 ATGAGTAACTCCGGAGGAGTGACGGCTTTGTCGCAACCTTTCCAGTCTGGGGCGAAGCAATACGGCGTGACGAAGCCGATATCAATGGCTGGGCCGACGGCGGTTGATTTACAAAGGACCTTGGAGTTAGAGAAGTTTCTGGTTCACTCTGGGCTATATGAGAGCAAGAAGGAGGATGCTAGGAGAGAAGAGGTCCTTCATCGACTTGGACAGATAGTAAAGGATTGGGTGAAGCAACTTACTCGACTAAGGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATACTCACATTCGGTTCTTATCGACTAGGCGTTCATGGTCCTGGGGCAGACATAGACACGTTATGTATTGGACCAACCTATGTGAACCGAGAGGAGGACTTTTTCTTTGTATTGCATGACATTCTAGCTAACATGGATGAGGTGTCGGAACTGCAACCAGTTCCAGATGCTCATGTACCAGTTATGAAATTCAAATTTGATGGAATATCAATTGATCTCCTGTATGCCAGTATATCTTGCTTGGTTGTGCCAGAAAACTTGGACATATCTGATTTATCTGTCCTATACGATGTGGACGAGCCTACTGTTCGAAGTCTGAATGGATGCCGAGTTGCAGATCAAATTTTAAAGCTTGTTCCAAATGTTGAGCACTTTCGAACAACTCTCCGGTGCTTAAAACTTTGGGCTAAAAGACGAGGCGTTTATTCCAATGTGACTGGATTTCTTGGTGGTGTGAACTGGGCCATTCTTGTTGCTCGAGTGTGCCAGCTCTATCCAAATGCAGTTCCAAGTATGCTTGTCTCTCGATTCTTTCGGGTGTATACTCAGTGGCGCTGGCCAAATCCTGTTATGTTATGTCCAATTGAGGAGAATGAACTTGGATTTTCTGTTTGGGATCCTCGTAAAAATCCTCGTGACCGAAAACATCATATGCCCATCATTACTCCTGCCTATCCCTGTATGAATTCTAGTTACAATGTTTCAACAAGCACACTGCGTGTTATGATGGAACAGTTTCAATATGGCAATAAGATATGTGAGGAAATAGAGCTGAATAAAGCCCATTGGAGGCGTATGTTTGAGCCATACCTTTTCTTTGAAAGCTATAAAAATTATCTGCAAGTTGACATTGTAGCAGCTGATGCTGATGACTTGCTAACATGGAAGGGTTGGGTGGAATCTCGACTTCGGCAGCTGACTTTGATGATTGAACGTGACACTCTTGGGAAGTTGCAGTGTCATCCTTATCCTCATGAGTATGTGGATGCTTCTAAACAATGTGCACATTGTGCTTTCTTCATGGGCTTGCAGAGGAAGCAAGGGGAGATTGTTCAAGAAGGTCAACAGTTTGATATACGGGAGACAGTTGATGAGTTTCGGCATTCTGTTAATATGTACATGTTCTGGAAACCTGGGATGAAAATACACATTTCTCATGTTCTTAGAAGGCAAATTCCATCATATGTTTTACCTAATGGTTTTAGCAAGAGATCTCGACCATCAAGGCCAACAGCACAAGTAGAAGAACCTGCTAAATCATTTCATGTAGATGAGGTGTATGGGACTGAACATGTTGAGGGAAACCGTAAGAGGAAAAATGGGGGCAGGGTGGGTGAGAAGCATGGTGTTGCTGTAAAAAGGCTTTCTAGTAGTCCTTACAGGCAAGATTCAGTTTCTTCAGATGTTTTGGATAAGTCATCGGATAGCTTGGGTAGCAGTGCAAGAAGCAGAATGTGCCAGTTTGAAGTGAACAGATTTCAATGTTTGGCTTCCAATGGTTTGTCTATTGGTGCCATACCTGATGGTCAAGAGTTGAGATCTATGGAGAGCATTGAATTGTCCTACAGAGGGCAAAATGATATGAATAAAGGAATGACATCTCCTGAACAAGAACCTGAATCTGCATCAAATTCAAGTGTCATTACATCTGCCACAAGTGATGGTGGTTCTTCAGAGGATGTTGGGTTTGAATCAGTGGCAGACTATGGCGGGAATAACATGGGAGTTGAGGGGACTGTTGGAGAAGGTGATGAGCTGGCCTCTTTGCAGGATGTTACATGTGGGAGAGAATCTGTTGCACTTCTGGAGAATGCAATTACAAGTGGAAAAGGATCATTGCAGCGATGGAACATAGGAAAGGTGGTTGATTCCAGAGGGGCATAG 2175 0.4363 MSNSGGVTALSQPFQSGAKQYGVTKPISMAGPTAVDLQRTLELEKFLVHSGLYESKKEDARREEVLHRLGQIVKDWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGPTYVNREEDFFFVLHDILANMDEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPENLDISDLSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKLWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRKHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELNKAHWRRMFEPYLFFESYKNYLQVDIVAADADDLLTWKGWVESRLRQLTLMIERDTLGKLQCHPYPHEYVDASKQCAHCAFFMGLQRKQGEIVQEGQQFDIRETVDEFRHSVNMYMFWKPGMKIHISHVLRRQIPSYVLPNGFSKRSRPSRPTAQVEEPAKSFHVDEVYGTEHVEGNRKRKNGGRVGEKHGVAVKRLSSSPYRQDSVSSDVLDKSSDSLGSSARSRMCQFEVNRFQCLASNGLSIGAIPDGQELRSMESIELSYRGQNDMNKGMTSPEQEPESASNSSVITSATSDGGSSEDVGFESVADYGGNNMGVEGTVGEGDELASLQDVTCGRESVALLENAITSGKGSLQRWNIGKVVDSRGA 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2051 724 Gene3D Beta Polymerase, domain 2 54 210 IPR043519 -
Prci12g2051 724 Pfam Nucleotidyltransferase domain 95 171 IPR002934 GO:0016779
Prci12g2051 724 FunFam Poly(A) polymerase alpha, putative 54 210 - -
Prci12g2051 724 FunFam Putative poly(A) polymerase gamma 198 364 - -
Prci12g2051 724 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 369 494 IPR011068 GO:0003723|GO:0016779|GO:0031123
Prci12g2051 724 Gene3D - 22 364 - -
Prci12g2051 724 Pfam Poly(A) polymerase predicted RNA binding domain 369 426 IPR007010 GO:0003723|GO:0043631
Prci12g2051 724 PANTHER POLY A POLYMERASE 15 530 - -
Prci12g2051 724 SUPERFAMILY Nucleotidyltransferase 21 215 IPR043519 -
Prci12g2051 724 MobiDBLite consensus disorder prediction 496 516 - -
Prci12g2051 724 MobiDBLite consensus disorder prediction 551 575 - -
Prci12g2051 724 FunFam Nuclear poly(A) polymerase 4 368 484 - -
Prci12g2051 724 MobiDBLite consensus disorder prediction 554 575 - -
Prci12g2051 724 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 366 - -
Prci12g2051 724 CDD NT_PAP_TUTase 61 216 - -
Prci12g2051 724 MobiDBLite consensus disorder prediction 622 656 - -
Prci12g2051 724 Gene3D Poly(A) polymerase predicted RNA binding domain 369 484 - -
Prci12g2051 724 Pfam Poly(A) polymerase central domain 22 366 IPR007012 GO:0043631|GO:1990817
Prci12g2051 724 MobiDBLite consensus disorder prediction 622 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2051 Prci-Chr12 38066687 38072656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2051 K14376 - qsa:O6P43_018222 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2051 12 38066687 38072656 Prci12g2051 12 38066687 38072656 ECH