Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2049 ATGAGGAGGGTGGTTATCGGAGCTACAGTGATAGGTGCCGCGACTGCGTGTGCGGTGGCGGTTCTTCTGGTGCGCCACCACATGAAGAAATCACGACTGTGGGCCAGAGCGATGGTCATTTTACAGGAGCTGGAGGAAAAGTGCGCCACTCCCATCGGGAAGCTGAAGCAGGTCGCCGATGCAATGACGGTGGAAATGCACGCCGGGCTTGCCTCAGAAGGTGGAAGCAAGCTCAAGATGCTCCTCACATATGTTGATAATCTTCCAAATGGGAATGAGGAAGGATTATTTTATGCATTGGACCTTGGAGGAACGAACTTCCGTGTGTTGCGAGTGCAACTGGGAGGGAAGGATGGTGGTGTTATTAATCAAGAATTTACTGAGGTGTCAATTCCTACTAACTTAATGGTTGGGACAGCAGATGAACTCTTTGACTATATTGCAGCAGAAGTTGCAAAATTTGTTGCCAATGAAGGTCAAGATTTTCAAGTTCCTCTTGGTAGACAAAGGGAGTTAGGTTTTACCTTTTCATTCCCTATTATGCAAACATCAATTGCTTCTGGAAACCTCATCAAGTGGACAAAAGGCTTCTCCATAGATGACGCGGTTGGTCAGGACGTTGTGGCAGAATTGACAAAAGCCATTGAGAGAAAAGGTTTGGATATGCGTGTAACAGCTCTGGTCAATGATACAGTTGGGACATTAGCAGGAGGTCGATATACAAACAAAGATGTCATTGCTGCTGTTATTTTAGGTACTGGAACCAATGCAGCATATGTGGAGCGTGCTCAAGCAATACCCAAATGGCATGGTCTTTTGCCGAATTCTGGAGAAATGGTTATTAACATGGAGTGGGGAAACTTCCGTTCATCACATCTTCCATTAACTGAGTACGATCTTTCACTAGATGCCGATAGTTTAAACCCTGGTGATCAGATTTTTGAGAAGTTAATTTCTGGAATGTATCTGGGAGAAATTGTCCGCCGAGTGCTATGCAGAATGGCTGAAGAAGCTTGTTTATTCGGTGATACTGTTCCTCCAAAATTGAAAGTTCAATTTATATTAAGGACCCCGGACATGTCTGTGATGCACCATGATACATCTGCTGATCTCAATGTGGTTAGAAGCACACTGAAGAACGTCTTGGAGATACCAGATACCTCCCTGGAAGTGAGGAAGGTGGTTGTTCAGCTATGCAACATAGTTGCTACACGCGGTGCTCGTCTTGCGGCTGCTGGCATCTTGGGGATCTTGAAGAAACTAGGGAGAGACACCCTCGTGGATGACGAGAATCAGAAGAGCGTTATTGCCATGGATGGTGGATTATATGAGCATTACGCAGAGTACAGCAAGTGCTTGGAGAACACCCTAAGTGAATTGCTCGGTGAAGATGTCTCTAAAACTATTTGCATTGAGCACGCGAATGATGGTTCGGGCATCGGTGCAGCCCTTCTTGCTGCCTCTCATTCACAGTACCTTGATTGA 1485 0.4586 MRRVVIGATVIGAATACAVAVLLVRHHMKKSRLWARAMVILQELEEKCATPIGKLKQVADAMTVEMHAGLASEGGSKLKMLLTYVDNLPNGNEEGLFYALDLGGTNFRVLRVQLGGKDGGVINQEFTEVSIPTNLMVGTADELFDYIAAEVAKFVANEGQDFQVPLGRQRELGFTFSFPIMQTSIASGNLIKWTKGFSIDDAVGQDVVAELTKAIERKGLDMRVTALVNDTVGTLAGGRYTNKDVIAAVILGTGTNAAYVERAQAIPKWHGLLPNSGEMVINMEWGNFRSSHLPLTEYDLSLDADSLNPGDQIFEKLISGMYLGEIVRRVLCRMAEEACLFGDTVPPKLKVQFILRTPDMSVMHHDTSADLNVVRSTLKNVLEIPDTSLEVRKVVVQLCNIVATRGARLAAAGILGILKKLGRDTLVDDENQKSVIAMDGGLYEHYAEYSKCLENTLSELLGEDVSKTICIEHANDGSGIGAALLAASHSQYLD 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2049 494 FunFam Phosphotransferase 221 475 - -
Prci12g2049 494 SUPERFAMILY Actin-like ATPase domain 24 242 IPR043129 -
Prci12g2049 494 PRINTS Hexokinase family signature 312 334 - -
Prci12g2049 494 PRINTS Hexokinase family signature 224 240 - -
Prci12g2049 494 PRINTS Hexokinase family signature 172 197 - -
Prci12g2049 494 PRINTS Hexokinase family signature 472 488 - -
Prci12g2049 494 PRINTS Hexokinase family signature 247 261 - -
Prci12g2049 494 PRINTS Hexokinase family signature 98 114 - -
Prci12g2049 494 PRINTS Hexokinase family signature 395 417 - -
Prci12g2049 494 ProSiteProfiles Hexokinase domain profile. 35 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Prci12g2049 494 PANTHER HEXOKINASE 13 490 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Prci12g2049 494 Gene3D - 83 486 - -
Prci12g2049 494 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Prci12g2049 494 SUPERFAMILY Actin-like ATPase domain 244 491 IPR043129 -
Prci12g2049 494 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Prci12g2049 494 Gene3D - 61 475 - -
Prci12g2049 494 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Prci12g2049 494 FunFam Phosphotransferase 83 251 - -
Prci12g2049 494 Pfam Hexokinase 247 487 IPR022673 GO:0005524|GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2049 Prci-Chr12 38053311 38058633 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2049 K00844 - qsa:O6P43_018221 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2049 12 38053311 38058633 Prci12g2049 12 38053311 38058633 ECH