Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2042 ATGGCCTCTTACAGGCCTTTTCCTCCGCAATCGTCGTATGGTCCACCTCCGAGTCAAAACCCTATAGCACCAGGACATCCACCTCAACAACGTGGAAATCAGTACAATCAGAGCTGGGGTTATGGTGGAGGCGATGGTAGTATGCCGTCAGCTCCTTCTACTTCTTTTCCCCAGAACTACAACCAAATGGCCCCAAATTCTAATTATCATCATGGTGGATATGGATCATCATCATCTTCACAGCATTATGGTGCTCCGAGAAGTCAACAACCCCCTCCCCCTCCTCCTTCCCATCAACAGTATCCATATCAGCCACCACCTCCTCCCCCACCTGAAACTTCTTACCCGCCTCCACCACCTCCTCCGCCACCAGCAACTTCAATGCCGCAACAAAATTCAGCTAACTTGCAGCCTCCACCACATCCTCCTCTGTATTATCCTTCTGGTCAGTTCCCTCAGTATGACCAGCAGCCACCTCCACCTCCTCTGTCTCCGCCACCAAGTTCTTCTGTTCCACCTCCACCTCCTCCAAGTTCACCGCCATCGGCTGCAGCTCCTCCGCAAAGTCAAATTAAGGATGAGAGGCGATTGCACGACCGCAATAAAGGGCCCATGCCATCCGGTAGGCGTGATCATGAACATTCACATCATGTGATGCCTCATAAACAGCAGAAGCCCGCTGTTCCTGCAATGCCACCAAAGAAATCAAATGGGCCTCCTGGGAGGATTGAGACAGAGGAGGAAAGGAGGTTGAGAAAAAAGAGAGAATTTGAGAAGCAAAGACAGGAAGAAAAACACAGGCAGCAGCTGAAGGAATCACAGAATAGTGTTCTGCAAAAGACCCAAATTTTGTCATCTGGGAAGGGGCATGGTTCAATTGTAGGATCGCGAATGGGTGAAAAGAGGACCACTCCACTATTGAGCGGTGACAGAATTGAAAATAGGTTGAAAAAGCCCACGACCTTTTTGTGCAAGCTGAAATTCCGAAATGAACTTCCAGATCCAAGTGCACAACCCAAGCTTATGGCATTCAAGAAAGACAAAGATCAATATTCGAAGTATACAATCACATCTCTGGAGAAATTATATAAGCCCAAACTTTTTGTGGAGCCAGATCTTGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTTCCGGCATCAGACCACCTCTTGCTCTGGAAGATGAAGAATTATTGCGAGATGATGAAGCGGTAACCCCTGTTAAAAAGACCGGCATAAGAAGAAAAGAAAGGCCTACTGATAAAGGTGTTGCTTGGCTTGTTAAAACACAATACATATCTCCTCTGAGCATGGAATCAACAAAACAGTCTTTAACTGAAAAACAAGCAAAAGAACTTAGAGAGATGAAGGGAGGCCGCAATATTTTGGAAAATTTCAACAATAGGGAAAGACAAATCAAGGAAATAGAAGCTTCATTTGAAGCAGCTAAATTACCCCCTGTTCATGCAACCAACAAAAATTTGTATCCTGTTGAGGTTCTGCCTCTGCTGCCTGATATTGAAAGACATGATCACCGGTTCGTTGTTGCTGCATTTGATAGTGCTCCAACAGCTGATTCAGAAATTTACAGCAAGTTGGAGAAATCTGTTCGTGAAGCCCATGAATCGAGGGCAATTATGAAAAGTTATACTGCAACAGGTGCAGATCATGTAAATCCTGAGAAATTTCTGGGATACATGGTCCCGACACCTGGAGAGCTGTCAAAGGATATGTATGATGAAAGTGAAGATATCTCATATTCTTGGGTTCGGGAATATCTCTGGGATGTTCGAGGTGATGATGCAGATGACCCTGCTACATACCTGGTTTCTTTTGAGGAATCAGAAGCACTATATTTGCCTCTACCAACAAAAATCCTGTTGAGAAAAAAGAGGGCTAAAGAGGGAAGATCTACTGATGAGGTTGAGCAATTTGCAGCACCTTCAAAAGTGACTGTAAGGCAAAGGCCAACCGTTTCGGCAATTGAACGGAAGGATTCTGTGGGTTACACAAACATAAAGGGAAGTTCTTCAAAGAGAAGGGCTTTAGACATGGATGACGATCTGGAACAGCAACATAGAGTTGCAATGCACCAGGATAATTATCAATCTAGTGGAGCGGAGGATGACATGTCTGAATGA 2151 0.4519 MASYRPFPPQSSYGPPPSQNPIAPGHPPQQRGNQYNQSWGYGGGDGSMPSAPSTSFPQNYNQMAPNSNYHHGGYGSSSSSQHYGAPRSQQPPPPPPSHQQYPYQPPPPPPPETSYPPPPPPPPPATSMPQQNSANLQPPPHPPLYYPSGQFPQYDQQPPPPPLSPPPSSSVPPPPPPSSPPSAAAPPQSQIKDERRLHDRNKGPMPSGRRDHEHSHHVMPHKQQKPAVPAMPPKKSNGPPGRIETEEERRLRKKREFEKQRQEEKHRQQLKESQNSVLQKTQILSSGKGHGSIVGSRMGEKRTTPLLSGDRIENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYSKYTITSLEKLYKPKLFVEPDLGIPLDLLDLSVYNPSGIRPPLALEDEELLRDDEAVTPVKKTGIRRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRNILENFNNRERQIKEIEASFEAAKLPPVHATNKNLYPVEVLPLLPDIERHDHRFVVAAFDSAPTADSEIYSKLEKSVREAHESRAIMKSYTATGADHVNPEKFLGYMVPTPGELSKDMYDESEDISYSWVREYLWDVRGDDADDPATYLVSFEESEALYLPLPTKILLRKKRAKEGRSTDEVEQFAAPSKVTVRQRPTVSAIERKDSVGYTNIKGSSSKRRALDMDDDLEQQHRVAMHQDNYQSSGAEDDMSE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2042 716 MobiDBLite consensus disorder prediction 135 184 - -
Prci12g2042 716 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 293 716 IPR007133 GO:0006368|GO:0016570|GO:0016593
Prci12g2042 716 MobiDBLite consensus disorder prediction 191 220 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 673 716 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 699 716 - -
Prci12g2042 716 Coils Coil 243 263 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 1 312 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 682 698 - -
Prci12g2042 716 Pfam Paf1 322 682 IPR007133 GO:0006368|GO:0016570|GO:0016593
Prci12g2042 716 MobiDBLite consensus disorder prediction 240 271 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 87 128 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 9 24 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 25 86 - -
Prci12g2042 716 MobiDBLite consensus disorder prediction 272 289 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2042 K15174 - qsa:O6P43_027715 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2042 12 37974781 37981278 Prci12g2042 12 37974781 37981278 ECH