Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2041 ATGGACAGAAGCCAATCTCACAGGCAACTTGCTGCCATGAAACAATCCCTCTTTGATCAGGGATATCTCGATGAACAATTCATCCAACTGGAGGAACTGCAGGATGATGCTAACCCTAACTTTGCAGAAGAGATTGTGACTCTTTACTTCCGTGACTCATCCAGATTCATTTCAAACCTCCAGCAAGCAATGGAGAAGAATCCACTGGATTTCGACAAGCTTGATAGCATCATGCATCAGTTCAAAGGAAGCAGCTCCAGCATTGGAGCACAAAAAGTAAAAGCAGAGTGTACCCTGTTTAGGGAATATTGCAAAGCAGAAAATGCAGAAGGATGCATGAGGAGCTTTCAACAACTGAAGAAAGAACATGCTGTACTGAGAAAGAAACTTGAAGCTTACTTTCAGCTTGCCAAGTAA 417 0.4269 MDRSQSHRQLAAMKQSLFDQGYLDEQFIQLEELQDDANPNFAEEIVTLYFRDSSRFISNLQQAMEKNPLDFDKLDSIMHQFKGSSSSIGAQKVKAECTLFREYCKAENAEGCMRSFQQLKKEHAVLRKKLEAYFQLAK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2041 138 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Prci12g2041 138 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 137 IPR045871 GO:0000160|GO:0009927|GO:0043424
Prci12g2041 138 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 136 IPR036641 GO:0000160
Prci12g2041 138 FunFam Histidine-containing phosphotransfer protein 4 1 138 - -
Prci12g2041 138 Pfam Hpt domain 44 126 IPR008207 GO:0000160
Prci12g2041 138 Gene3D HPT domain 1 138 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2041 Prci-Chr12 37944741 37946080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2041 K14490 - qsa:O6P43_027716 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0832 13 6991498 6993226 Prci12g2041 12 37944741 37946080 CCT
Prci12g2041 12 37944741 37946080 Prci13g0832 13 6991498 6993226 ECH
Prci12g2041 12 37944741 37946080 Prci12g2041 12 37944741 37946080 ECH