Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2020 ATGGTCACTGAACAAAAAACACCGGAGGAGGAGAAGGTGGTGGTGGTGCTGGAGAATGGCACAATGAGCCGCTCACTCGTCAGACCTTCCGCCGGGATCCGCTGGAAAGCTGACGCGATACACGTGATTCTGAGGCTGTTATGCGTGGTCAGTTCAGTGATCGCACTTTCGTTCATGGTGACGGCCAAGCAAGCTAGCTCTGTCTCCATCTATGGCTTTCACCTTCCGGTTTTCTCCAAGTGGTCATACTCTGAGTCGTTCGAATATCTTGTTGGTGTTTCTGCTGCTGTTGCGGCTCACTCCTTGCTGCAGCTACTCATTGGTACATCACGGTTGCTAAAGAAATCTCCTATGATTCCCTCAAGAAATCACGCATGGCTTATATTTGCTGGGGATCAGTGTTGTGCCCAAAAATTGCAGGCATTTGCCTATGCACTGATAAGCGCTGGTTCTGCTGCTTCTGGAGTGACCAATCTGAATCACACTGGAATCAGGCATCCAGCTCTGCCGAGTTTCTATTTTTCCACTCTAGCAGAATGTAATCCATGGGAGGCTGAAGTTGTGTGTGTTAAATCAGGAAAAGTTATTAATTATATGTAA 600 0.4783 MVTEQKTPEEEKVVVVLENGTMSRSLVRPSAGIRWKADAIHVILRLLCVVSSVIALSFMVTAKQASSVSIYGFHLPVFSKWSYSESFEYLVGVSAAVAAHSLLQLLIGTSRLLKKSPMIPSRNHAWLIFAGDQCCAQKLQAFAYALISAGSAASGVTNLNHTGIRHPALPSFYFSTLAECNPWEAEVVCVKSGKVINYM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2020 199 Pfam Casparian strip membrane protein domain 37 167 IPR006702 -
Prci12g2020 199 NCBIfam plant integral membrane protein TIGR01569 42 163 IPR006459 -
Prci12g2020 199 PANTHER CASP-LIKE PROTEIN 4A4 34 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2020 Prci-Chr12 37791335 37795071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2020 36 188 Miscellaneous Gene Families AT3G16300 42.484 6.87e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2020 - - cave:132186929 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2020 12 37791335 37795071 Prci12g2020 12 37791335 37795071 ECH