Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1998 ATGGACAGGGAATACCCAGCCTCTTCTTCTTCTTCTTCATCACCATCGTCATCGTCATCGTCATCGTCATCAACAACGGCAATGACCAGCAACAATCTCCCACCACCCGAAGATGCTTGGCTTGATACCTGCCACAAGTGGCTGCCTCGTTGGGAATCTCATTCACTTTCTCATCAGTCAACAATTCCTATTTCTATATCAAGAGTTAACCAAGTTGATGCTGCTAGACTGGATGTTGAAATGTCAGCCATGTTGAAGGAACAGTTGGTTAAAGTGTTTTCTTTAATGAAGCCAGGAATGTTATTTCAGTACGAAGCTGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGAGATTCTCAATTTGGGTTGATAAGCCAACTCCAGGTATTGCTCTCATGAACCTGAGGTATAGAGATGAGCGTGCAGTTGAACCAAGAGAAAAAGTCAGAACTGGTCTTGAAGGTCCTGGATTGACTGTTGCTCAAAAGATTTGGTATTGTATCGCAACTGTTGGTGGTCAGTATATCTGGGCTCGCATACAATCCTTTTCTGCTTTTCGTCGGTGGGGTGATTCTGATCAGAGGTCACTGGCTCGTCGGGTATGGATCCTTATACAACGTATAGAAGGAATTTATAAAGCTGCTTCATTTGGCAACTTGTTGATATTTCTTTATACTGGAAGATATAGAAATCTCATTGAAAGGGCTTTACGAGCTAGGCTTGTCTATGGGAGCCCAAATATGAACCGTGCTGTTAGCTTTGAATATATGAACCGGCAGTTAGTTTGGAATGAATTCTCGGAAATGTTGCTGCTGCTTCTTCCCCTTCTTAATTCATCATCTATGAGAAATCTCCTTCGACCATTTTCGAAGGATAAATCCTCAAATTCAGATCAAGATGACAATGTGTGCCCCATTTGTCGATCTACTCCAACTATTCCTTTTGTTGCTCTTCCCTGTCACCACAGATATTGTTACTACTGTCTTCGAACACGCTGTGCTGCTTCTCCATCATTTAGATGTTCCAGGTGTAGTGAGCCAGTCGCTGCTATGCAGCGGCATAATGGCGGTATCACCAGTGGATAA 1086 0.4291 MDREYPASSSSSSSPSSSSSSSSSTTAMTSNNLPPPEDAWLDTCHKWLPRWESHSLSHQSTIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPREKVRTGLEGPGLTVAQKIWYCIATVGGQYIWARIQSFSAFRRWGDSDQRSLARRVWILIQRIEGIYKAASFGNLLIFLYTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSMRNLLRPFSKDKSSNSDQDDNVCPICRSTPTIPFVALPCHHRYCYYCLRTRCAASPSFRCSRCSEPVAAMQRHNGGITSG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1998 361 MobiDBLite consensus disorder prediction 1 36 - -
Prci12g1998 361 SUPERFAMILY RING/U-box 297 350 - -
Prci12g1998 361 MobiDBLite consensus disorder prediction 1 33 - -
Prci12g1998 361 ProSitePatterns Zinc finger RING-type signature. 320 329 IPR017907 -
Prci12g1998 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 358 IPR013083 -
Prci12g1998 361 CDD RING-HC_PEX2 304 348 IPR045859 -
Prci12g1998 361 PANTHER PEROXISOME BIOGENESIS FACTOR 2 29 359 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Prci12g1998 361 Pfam Pex2 / Pex12 amino terminal region 78 282 IPR006845 -
Prci12g1998 361 ProSiteProfiles Zinc finger RING-type profile. 304 345 IPR001841 -
Prci12g1998 361 Pfam Zinc finger, C3HC4 type (RING finger) 304 344 IPR018957 GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1998 K06664 - cave:132188569 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1998 12 37620676 37624177 Prci12g1998 12 37620676 37624177 ECH