Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1979 ATGCAGTCAGGGGAAGGTTTTTCTCTTGCTGGGTTTGGAAAAGGTTTGCACCATTTCGACATGAGGGGACGACTTATTGATCCGTATAAGCGAGTGGCATCCAAGGATCACATAATTTCATATGACAAAGAAGAAAACCCAGTACGTTTACTGAATGGAAAACCTTCTTGGAAGCGCTCATTGTGGCATGTATTAGTGGCCTCCATTTCTTCATTTTTATATGGCTACCATCTTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGACCTTGGATTTAGAGGGAATACCATGGCTGAAGGTCTGGTTGTAAGTACATCTTTGGGTGGCGCTTTTGTTGGATCTCTATTCAGTGGTTGGGTTGCAGATGGGGTTGGACGTCGAAGGGCATTCCAGTTATGTGCTTTGCCTATGATCATTGGGGCATCAATGAGTGCAACAACAAAAAGCCTGTGGGGTATGCTTTTGGGAAGGTTATTTGTTGGCACTGGAATGGGACTCGGCCCACCTGTTACAGCTCTTTACGTGGCTGAGGTGTCACCCACAGCTGTAAGGGGTGCTTTTGGTAGCATAACTCAAATCGCAACATGTTTTGGACTTATGGGCGCTCTATTTATTGGATTCCCATCCAAAGAATTAGTGGGTTGGTGGCGGATTTGTTTCTGGGTATCTGCCATTCCTGCTGCAATACTGGCCTTTTTCATGGAGTTCTGTGCTGAGAGTCCTCATTGGCTTTATAAGAGGGGAAGAAGCAATGAGGCTGAAGTAGAATTTGAGAAGCTCTTGGGAGGGATACACGTGAAACCTGCAATGACCGAACTGTTAAGGACTGGCAGAGATGATGAGACTGATAAGGTGAAATTTTCAGAATTACTCTATGGCCGTCATTCCAAAGTGATGTTCATTGGATCTACGCTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCCATTTTTTATTTCTCTTCGACGGTCTTTAAAACCTTTGGTATTCCATCTGGTCTTGCAAACACATGCGTAGGAATTTGCAATTTACTGGGGTCAGTTCTTGCAATGATTCTAATGGATAAACTTGGAAGGAAAGCGCTTCTCCTGGGGAGCTTTCTGGGCATGGCGGTGTCAATGGGTCTCCAGGTTATTGCTGCAAGTTCTTTGGCATCAGGGTCTGAAGCAATGTATTTATCTGTTGGTGGCATGTTGACGTTTGTCTTCACATTTGCCATGGGTGCTGGTCCCGTACCTTGTCTTCTCCTATCAGAAATACTACCTAGCAGGATCAGGGCAAAGGCATTGGCAATTTGCTTAGCTGTACATTGGATGATCAATTTCTTTGTTGGTCTGCTATTTTTGCGCTTACTGGAACAACTTGGAGCACAACTCCTGTATACTATATTTGGTGCATTCTGTCTGGCGACAGTGATATTTGTGAAGAGAAATGTTGTGGAAACGAAAGGAAAGTCACTCCAAGAAATTGAAGTTGCACTTCTTTCACAAGAAGCAGCATAG 1509 0.4394 MQSGEGFSLAGFGKGLHHFDMRGRLIDPYKRVASKDHIISYDKEENPVRLLNGKPSWKRSLWHVLVASISSFLYGYHLGVVNETLESISIDLGFRGNTMAEGLVVSTSLGGAFVGSLFSGWVADGVGRRRAFQLCALPMIIGASMSATTKSLWGMLLGRLFVGTGMGLGPPVTALYVAEVSPTAVRGAFGSITQIATCFGLMGALFIGFPSKELVGWWRICFWVSAIPAAILAFFMEFCAESPHWLYKRGRSNEAEVEFEKLLGGIHVKPAMTELLRTGRDDETDKVKFSELLYGRHSKVMFIGSTLFALQQLSGINAIFYFSSTVFKTFGIPSGLANTCVGICNLLGSVLAMILMDKLGRKALLLGSFLGMAVSMGLQVIAASSLASGSEAMYLSVGGMLTFVFTFAMGAGPVPCLLLSEILPSRIRAKALAICLAVHWMINFFVGLLFLRLLEQLGAQLLYTIFGAFCLATVIFVKRNVVETKGKSLQEIEVALLSQEAA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1979 502 ProSitePatterns Sugar transport proteins signature 1. 119 136 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 ProSiteProfiles Major facilitator superfamily (MFS) profile. 63 485 IPR020846 GO:0022857
Prci12g1979 502 PRINTS Sugar transporter signature 156 175 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 PRINTS Sugar transporter signature 420 432 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 PRINTS Sugar transporter signature 397 418 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 PRINTS Sugar transporter signature 311 321 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 PRINTS Sugar transporter signature 71 81 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 Gene3D MFS general substrate transporter like domains 56 497 IPR036259 -
Prci12g1979 502 FunFam facilitated trehalose transporter Tret1 56 498 - -
Prci12g1979 502 PANTHER SOLUTE CARRIER FAMILY 2 54 496 IPR045263 -
Prci12g1979 502 SUPERFAMILY MFS general substrate transporter 50 493 IPR036259 -
Prci12g1979 502 Pfam Sugar (and other) transporter 64 494 IPR005828 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 CDD MFS_GLUT_like 66 483 - -
Prci12g1979 502 ProSitePatterns Sugar transport proteins signature 1. 352 368 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci12g1979 502 NCBIfam sugar porter family MFS transporter 51 492 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1979 Prci-Chr12 37529940 37541533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1979 29 441 Organic Solute Cotransporters AT1G67300 66.903 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1979 - - qsa:O6P43_018171 758.444