Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1973 ATGGTGGAGCAGGAAGGTTACATGTCGAAGCTTTTCAATTTTAAAGGGAGGCATAAAAAGAGTGTGAGCGTTGAGAGTGGAAGCATCTTGGAATCTTCAAAAGAGGAAGATCCATTGTCTTCAAGAAGTCAAGGATCAAACGCTCTGAATGACGAGTCTGCTTCTGATCAAAATGGAGGTCCTGATAAGTCAAGCTCAACCATTGAAGAAGCAGCAGCAGTTAAAGAAGCTAAAGAGAAACTACACCAAGAAATGGAACAGATGAAGGAGAGATTTGCAAAACTGCTACTGGGCGAGGATATGTCTGGTAAAGGAACGGGTGTTTCCTCTGCTTTGGCTCTGTCTAATGCATTCACAAATCTTGCTGCTGCTGTGTTTGGTGAACAAAAACGACTAGAGCCAATGCCACCGGAGAGAAAAGCAAGATGGAGAAAAGAAATTGATTGGCTTCTTTCAGTTACTGATTACATCGTGGAAATGGTTCCATCACATCAAATAAATGAGGATGGCTCCCACATGGAGATTATGACGACAAGACAAAGAGTTGATCTCCTCATGAACGTACCTGCATTGAGAAAGCTTGATGCTATGCTTATTGATTGCCTGGACAACTTCGAAAGCCAAAGTGAGTTTTATTATGTATCAAAAGATTCAGACGACAATGAAAAGAGAAAAGGTGATGATAAGTGGTGGTTGCCCGTGCCTAAGGTTCCCCCAGAAGGTCTATCTGAAAACTCGAGAAAATTTCTGCAGCATCAGAAAGATTCTGTCAATCAAGTGCTTAAAGCAGCCATGGCCATAAATGCTCAAGTCATAACAGAAATGGAGATCCCTGAAAATTACATTGAATCCCTCCCAAAGAATGGGAGAGCTAGTCTGGGGGATTCAAACTACAGAAGTATTACAGTAGAATATTTTGATCCTGATCAGTTTCTGGTAACCATGGACCTGTCATCAGAGCATAAAATCTTAGACCTCAAGAACAGAATAGAGGCGTCTATAGTGATTTGGAAGAGGAAAATGAACCAGAAGGATGGGAAATCAGCCTGGGGTTCAGCTGTGAGTTTGGAAAAAAGGGAACTTTTTGAAGAGAGAGCAGAAACCATCTTGCTTCTCTTGAAGCAGCGTTTCCCTGGCCTTCCTCAATCTTCTCTAGATATCAGCAAAATCCAGTACAACAGGGATGTAGGGCAAGCAGTTCTTGAGAGCTATTCAAGAATACTAGAAAGTTTGGCATTCACAGTTCTCTCAAGAATAGAAGATGTACTCCATGCAGATTATCAAACTCAAAACCCATCAAAGAATGCTAAAAGAAGCGCTCTAAGGGGCGTTCCAAAGTCACCAAGTCCGACTCCTTCTAAACAAGAGTCGGATACAGGTGCGGCAGAAACACCTGTTTCAATGACACTTTCAGATTTCATGGGTTGGGAAGGTGATGCAGGTGACTCAGACATGAAGAAGGACTCTCAGGTTGTTACAGATGACTTGTGCAAAGACACGGAAGGAAAAATGCAAAAACTTCCCAACATAGACACCAACAAGAAGGTATCTTACCTTGAGAACTTGGGCGGCATGAGGAGCCCAACATCACGCCATTGA 1599 0.4253 MVEQEGYMSKLFNFKGRHKKSVSVESGSILESSKEEDPLSSRSQGSNALNDESASDQNGGPDKSSSTIEEAAAVKEAKEKLHQEMEQMKERFAKLLLGEDMSGKGTGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPSHQINEDGSHMEIMTTRQRVDLLMNVPALRKLDAMLIDCLDNFESQSEFYYVSKDSDDNEKRKGDDKWWLPVPKVPPEGLSENSRKFLQHQKDSVNQVLKAAMAINAQVITEMEIPENYIESLPKNGRASLGDSNYRSITVEYFDPDQFLVTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDGKSAWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSLDISKIQYNRDVGQAVLESYSRILESLAFTVLSRIEDVLHADYQTQNPSKNAKRSALRGVPKSPSPTPSKQESDTGAAETPVSMTLSDFMGWEGDAGDSDMKKDSQVVTDDLCKDTEGKMQKLPNIDTNKKVSYLENLGGMRSPTSRH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1973 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 30 490 IPR038937 GO:0005085
Prci12g1973 532 FunFam Rop guanine nucleotide exchange factor 9 276 392 - -
Prci12g1973 532 MobiDBLite consensus disorder prediction 430 492 - -
Prci12g1973 532 FunFam Rop guanine nucleotide exchange factor 14 308 435 - -
Prci12g1973 532 MobiDBLite consensus disorder prediction 446 466 - -
Prci12g1973 532 Coils Coil 68 98 - -
Prci12g1973 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 83 430 IPR005512 GO:0005085
Prci12g1973 532 Gene3D PRONE domain, subdomain 1 89 426 - -
Prci12g1973 532 Gene3D PRONE domain, subdomain 2 276 392 - -
Prci12g1973 532 ProSiteProfiles PRONE domain profile. 75 436 IPR005512 GO:0005085
Prci12g1973 532 MobiDBLite consensus disorder prediction 39 65 - -
Prci12g1973 532 MobiDBLite consensus disorder prediction 18 68 - -
Prci12g1973 532 MobiDBLite consensus disorder prediction 18 38 - -
Prci12g1973 532 FunFam Rop guanine nucleotide exchange factor 14 77 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1973 Prci-Chr12 37437985 37440702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1973 - - gmx:100781787 749.199