Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1954 ATGAGCACGCCGAACCAGATGAAGGCAAGAGACTTCATTGAGGAAGGGAAGAAACGGATTGTTTTTCTAGTCATATGCGTCGTGGGTCTGTCATATCTCATGTCGTTGACAAGCTCATCAGTTTGGGTAAACTTACCAGTTGCTACCTCCCTTGTTGTTATTCTCCGCTATCTATTGCTAGATTTTGATATGAAGAGAAAAGCTGCATTATATAACAGTAGACCGTGTACAACCACAGCTCAGTCTTCAAAGAAACCTCTTGAATTTCCTAAAGTTGTTGCAAAGTCAGATTGGAGAGAAAAGGTGAATTCTCCTGTTGTTGAGGAAGCAATGGATCACTTCACTAGACATCTAGTTTCTGAGTGGGTGACTAACCAGTGGTACTCTCGCTTGACACCAGATAGAGAGGGTCCTGAGGAGTTAGTGCAAATAATAATTGGTTTTCTTGGAGAGCTTTCAGGACGGATGAGGAATATAAACCTGATTGATCTTTTGATGAGTGATCTTATTAATCTCATTTGCACACACTTGGAGGTGTTTCGTGCTACTTTAGCAAAAATTGAAAAGCAAACTTCATCTCCTTTAACAATTGAATCTCTAGATACAGAATTGAAACCTGCTTTGGCTGCAGAGGACAAATTGCATCCTGCTTTATTTTCTGCTGAAGCCGAGCATAAGGTTTTGCAGCATTTGATGGAAGGTCTTATGTCAGTCACTTTCAAGCATGAGGATTTGCAGTGCTCTTCCATTCGACACACTGCTCGAGAACTACTTGTGCATGCAGTGATGAGACCTGTTCTCAACTTAGCCAGTCCAAGATTTGTTAACGAAAGAATTGAATCTGTTGTAATTAATAAGACCAAACTTAAAAAAGCAGCTAATGCAGTTCAGGAAGCATCTCACTCCACAGAAGATAGATTGAAGATATCTTCTGATCGTTTTCCTAAGATTTTAAATTCTTCTATTACTGGTTTAGAGCTGGTACAGCTAGGAAATAGTCATTCCAGAAATGCACAGTCATCTGTGGAAGATAATTTTGTTGATACTTTTTCTAAAGATCCATTGCGTTCAATTGATGCTCTATTAGCACTTTTGTGGAAGTCATTGCCATCAAACTCCCGAATTAATGATAATCAAAGTGTTAAACAATATCACTCAAGAGGGCAGTGGGGTGATATCTTGGATCTCATGTCCCAGAGAATGACCCAAACTCTTGCTCCAGAACATTTTGAGAACATGTGGACAAAAGGGAGAGGTTACAAGAACATGGATCGGGAGAATCAGTCAAGGGAGCTTGTCCTGCAACAAGTGGTAGGAAAATTGCCAAAAAGTGATCATAAGAAGGTGATACCAGGACCTGAAGAAAAGGAAACTAACTTTAAACTTAATCTCTCCAATGGTACCAGTGCTACCGCTAATTTGGGGTGCAGTAATCGGCTTACAGTAGAAGACACACCTGTTTGTGCAGACAGGAGTATATCAACTTGTCCATCAGTTACATCATCACAGGATGATGGCCAAAGCCACATGCGTCTGCTGATGGTTGATTCAGAGAGCAGTACTTCTGAAGATGATGAAACTAACACAATCACCAGGCTCAGTTCCCCTGGAACTAAAGTTTGGGATGGAAGAAGAAATAGAAATTGGGCCATTTCTCTCATTCATCACCCGCTAGAAAATTTTGACAGTCATGGTACAAAGATGAATAAGATGCAATCATGCTATCATAGACCACCCAGAACCCGATTTGGCTGGAAAAGATCAAGGTCAAGTGGTCATAACATGCACGAAGTTAATAGAACTAGCTTTTTTTCTGGAGATGAACAGGATATTCTTAGGTCTCCAAAATCAAATGTAAGTTCTGGGGACTCCAGTGATGATCCTGATGTTGATAATTTGGGTAGAATACACAGTGGAGCAGCAGCTTCTTCTTCAGCATCCTCTATTTCTAGGTCAGAACCTTGCAATGTGGCTGTTAATCCCCTGAAAAGTTCACTGCCAGTAGATTCCTTTTTCAAATTGAGATGTGAGGTCTTAGGTGCGGATATTGTGAAGAGTGGCTCAAGAACATTTGCTGTTTATTCCATATCTGTAACAGATGTAAATAATAAAAGTTGGACAATTAAAAGGAGGTTTCGTCATTTTGAGGAGCTACATTGGCGCTTGAAAGAGTTTCCTGATTATAACCTTCATTTGCCTCCGAAACATTTTCTAACAACAGGTTTAGATGTAACAGTTGTTCAGGAGCGTTGTAAATTGTTGGAAATTTATTTAAAGCTTCCAATAGTTTCAGGATCAATTGAAGCGTGGGACTTTCTCAGTGTCGACTCTCAGACATACCGTTTCTCAAATTTGCTTTCCATTGTCAAAACATTGCCAGCTGACATGGATGATAAACCATCCGAGAAAAGTAAAAGAACCTCCGATTTTTCTGTAAGGGACCTCTTTGCCTTCAGAAGAGAGAACTTTGTTGTTAGTAATCAGGCTGTTCTTGGAAAGGATTCTCAGGGCTTATTTGAAAATTCTGGCATTGATACAAGTACTAGAGCAGAGAAGAGTGACACTTCTCCTGAGAACTTGCCAAAGACAGTGAAAGGGAAAGAGCCTGATGGTTCGATTGAGGTGTCTGATTTAGTCCATGATACCTCTGACGCTCTTCCTAGAGAGTGGGTGCCTCCAAATTTGAGTGTTCCCGTATTGGATCTGGTCGGTGTTATCTTCCAGCTTCAAGATGGTGGATGGATTAGGCGGAAAGTTTTTTGGGTTGTTAAACAGATCCTACAACTAGGAATGGGTGATGCCTTTGATGATTGGTTGCTAGCCAAAATCCAGCTTCTCCGTAAGGGGTCAGTGATTGCTTCCGGGATCAGGCGAGTTGAAAAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAGTCGAAGGCCACCACCAATTTCCAGCCCATCTCAGAATTCACCTCATGGCCAGCAACCTAAAGATTCATCTTCTTTAAGGAAGGATGAGCAGCAAAAGCAAGAGGAAGATCGTCGTGCGAAGTTTGTGTATGAGCTAATGATTGATCATGCACCAACAGCAATTGTAGGTCTTGTTGGTCGCAAGGAGTATGAACGGTGTGCCAGACATCTCTATTTTTTTCTTCAGTCATCTGTTTGTTTGAAGCAGCTGGCTTTTGACATTGTTGAATTACTAATGGTGACAGCATTTCCAGAACTAGATTATTTATTCAAGCAACTACACGAAGAAAAGCATAAGTTTGGCAAATTCAATAGGAATTAG 3285 0.4079 MSTPNQMKARDFIEEGKKRIVFLVICVVGLSYLMSLTSSSVWVNLPVATSLVVILRYLLLDFDMKRKAALYNSRPCTTTAQSSKKPLEFPKVVAKSDWREKVNSPVVEEAMDHFTRHLVSEWVTNQWYSRLTPDREGPEELVQIIIGFLGELSGRMRNINLIDLLMSDLINLICTHLEVFRATLAKIEKQTSSPLTIESLDTELKPALAAEDKLHPALFSAEAEHKVLQHLMEGLMSVTFKHEDLQCSSIRHTARELLVHAVMRPVLNLASPRFVNERIESVVINKTKLKKAANAVQEASHSTEDRLKISSDRFPKILNSSITGLELVQLGNSHSRNAQSSVEDNFVDTFSKDPLRSIDALLALLWKSLPSNSRINDNQSVKQYHSRGQWGDILDLMSQRMTQTLAPEHFENMWTKGRGYKNMDRENQSRELVLQQVVGKLPKSDHKKVIPGPEEKETNFKLNLSNGTSATANLGCSNRLTVEDTPVCADRSISTCPSVTSSQDDGQSHMRLLMVDSESSTSEDDETNTITRLSSPGTKVWDGRRNRNWAISLIHHPLENFDSHGTKMNKMQSCYHRPPRTRFGWKRSRSSGHNMHEVNRTSFFSGDEQDILRSPKSNVSSGDSSDDPDVDNLGRIHSGAAASSSASSISRSEPCNVAVNPLKSSLPVDSFFKLRCEVLGADIVKSGSRTFAVYSISVTDVNNKSWTIKRRFRHFEELHWRLKEFPDYNLHLPPKHFLTTGLDVTVVQERCKLLEIYLKLPIVSGSIEAWDFLSVDSQTYRFSNLLSIVKTLPADMDDKPSEKSKRTSDFSVRDLFAFRRENFVVSNQAVLGKDSQGLFENSGIDTSTRAEKSDTSPENLPKTVKGKEPDGSIEVSDLVHDTSDALPREWVPPNLSVPVLDLVGVIFQLQDGGWIRRKVFWVVKQILQLGMGDAFDDWLLAKIQLLRKGSVIASGIRRVEKILWPDGIFITKHPSRRPPPISSPSQNSPHGQQPKDSSSLRKDEQQKQEEDRRAKFVYELMIDHAPTAIVGLVGRKEYERCARHLYFFLQSSVCLKQLAFDIVELLMVTAFPELDYLFKQLHEEKHKFGKFNRN 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1954 1094 SUPERFAMILY PX domain 673 777 IPR036871 GO:0035091
Prci12g1954 1094 ProSiteProfiles PXA domain profile. 104 283 IPR003114 -
Prci12g1954 1094 PANTHER PX SERINE/THREONINE KINASE PXK 100 1089 - -
Prci12g1954 1094 Pfam PXA domain 104 281 IPR003114 -
Prci12g1954 1094 SMART PXA_3 104 287 IPR003114 -
Prci12g1954 1094 Pfam Sorting nexin C terminal 914 1052 IPR013937 -
Prci12g1954 1094 Gene3D - 673 784 IPR036871 GO:0035091
Prci12g1954 1094 Pfam PX domain 703 759 IPR001683 GO:0035091
Prci12g1954 1094 MobiDBLite consensus disorder prediction 851 874 - -
Prci12g1954 1094 MobiDBLite consensus disorder prediction 842 874 - -
Prci12g1954 1094 SMART PX_2 670 776 IPR001683 GO:0035091
Prci12g1954 1094 MobiDBLite consensus disorder prediction 595 627 - -
Prci12g1954 1094 ProSiteProfiles PX domain profile. 672 790 IPR001683 GO:0035091
Prci12g1954 1094 MobiDBLite consensus disorder prediction 570 636 - -
Prci12g1954 1094 MobiDBLite consensus disorder prediction 971 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1954 Prci-Chr12 37208328 37217171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1954 K17925 - gmx:100790491 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1954 12 37208328 37217171 Prci12g1954 12 37208328 37217171 ECH