Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1943 ATGCTTGACAAATTTTTGAAGCCGAAATTCTATAGAAAATGCAAAACGTACCTGGATTGCACAAAATCGAGGCTAGAGGCGATACGGAAGAAGAGGAAAGTAGTGTTGAAGTTTCTGAAGAATGACATCGCTGATCTTCTCAAGAGTGGCCTTGACGACAGTGCATATGGAAGAGCTGAAGGGTTCATGATCGAGGAAAACATGTCAGCCTGCTACGAACTTCTTGTAAAGTTTGTCGAATGCATATCAGATCATCTTCAAGTCCTTTCTAAGGAGAGAAATTGCCCTGAGGAATGTAAGGAAGCTATACCGTCGTTGATGCATGCTGCAGCAAGATTTGCTGATCTGCCAGAATTGCGTGACCTCAGAACTCTGTTTAAGGAGAAATTTGGGGATTCTCTTGAACCTTTCATAAGTAAAGAGTTTGTGGAGAAGTTGAGGCCACAACCTACCGAAGAAATGAAGATTCAGATATTAAATGATATAGCCCAAGAATTCTCTATAAAGTGGAATAGCAAGGCTATGGAGGAGAAATTCAACATGTCCTTCTCATCACTTCAAGAGGGGCCTAGGCACACGTTACTAATCAGTAATGAAGACACATTGAGGTTTCAGAGCTGTAGCGATGACGAAATAAGTACAGACATATCGTCCCAGGATGGTCCAAAGACTCGTTCAAGCTCATTAGAAAGTTTTTCCGAGGATGAACTAGATTATACCAAGAAACCATCTCAACATAAGATTGATCCTCCTCCTTGCTTCACGCCAAAACCTGATGTTAATGAGCCAGTTGTTCAAGAAAAGCCAAAACCCCAGTCAGTCAGAACTAGAGGTCCCAAAACACTACCTGGTCATCAGAAAACTGTTTCTGATATTGATTCAAGGAATGAAGAAGATAGGATAATGGACGGGCTTTTGATGCATTACAGCATCAAAAAATCTACTTCTGAATCGAAGAGGCTGAAGCAGAAAACGATTAGGCACATAAAATCAGATTCCGATGGGCAGCTTACTAGAGGAACATCTCTTCCCGCTCAACTCTCAACTCCTGTAGAGCCAGAAATACCAAGTGAAGGAGCAAAGCATGTGCATCCTAAGCTACCAGATTATGATGACTTAACAGCTCGTCTTGCAGCTATCAGAGGGAGATGA 1152 0.4193 MLDKFLKPKFYRKCKTYLDCTKSRLEAIRKKRKVVLKFLKNDIADLLKSGLDDSAYGRAEGFMIEENMSACYELLVKFVECISDHLQVLSKERNCPEECKEAIPSLMHAAARFADLPELRDLRTLFKEKFGDSLEPFISKEFVEKLRPQPTEEMKIQILNDIAQEFSIKWNSKAMEEKFNMSFSSLQEGPRHTLLISNEDTLRFQSCSDDEISTDISSQDGPKTRSSSLESFSEDELDYTKKPSQHKIDPPPCFTPKPDVNEPVVQEKPKPQSVRTRGPKTLPGHQKTVSDIDSRNEEDRIMDGLLMHYSIKKSTSESKRLKQKTIRHIKSDSDGQLTRGTSLPAQLSTPVEPEIPSEGAKHVHPKLPDYDDLTARLAAIRGR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1943 383 Pfam Regulator of Vps4 activity in the MVB pathway 15 168 IPR005061 GO:0015031
Prci12g1943 383 MobiDBLite consensus disorder prediction 211 228 - -
Prci12g1943 383 MobiDBLite consensus disorder prediction 229 245 - -
Prci12g1943 383 MobiDBLite consensus disorder prediction 211 291 - -
Prci12g1943 383 Gene3D - 4 179 IPR042277 -
Prci12g1943 383 PANTHER IST1 FAMILY MEMBER 13 381 IPR005061 GO:0015031
Prci12g1943 383 MobiDBLite consensus disorder prediction 330 367 - -
Prci12g1943 383 FunFam Vacuolar protein sorting-associated protein IST1 5 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1943 Prci-Chr12 37123671 37126840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1943 - - pcin:129289650 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1943 12 37123671 37126840 Prci12g1943 12 37123671 37126840 ECH