Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1896 ATGACTCGACATGGGACTTCTTTCTCTAATAGTAACATCCTCGAACACTTTGTCGGAGATTGGAGAAATATTGAGAAGATGGGTTCTTTAACAGTTTCCCAGATTCCTATTATTGACTTCAGTGATGAAAACATGAAGCCTGGTACAGACACCTGGTTTTCAGCTAGCCAAGTGTTGCGAAGTGCTGTAGAGAGTCATGGTTGTTTTTATGCAATGACTAATGAGATTTCTATGGAGCTTTTCAACTCAGTGTTTGCTCTAATGAAAGAACTGTTTGATCTTCCACTAGAAACCAAAAATCAAAAGACCAGTGAAAAGCCTAACCATGGTTACTATCCACGAATTCCAAAAGCACCATTATATGAATCTGTTGGAATCGACTTGGATGGCTCCACCAACGAGGAAGCAATTCAAATGTTTGCCAACAAGATGTGGCCGAAAGGATATGATCATTTCTGTGAGGCAATCAATCTCTATGCAAAGCTGCTCGTAGAAATGGACCGAACTGCTAAAAGATTATTGTTTGATGCTTATGGTTTGGACAAAAGAGACTGTGATTCCTTGCTTGAATCAACCAACTACATGTTTCGGAGCTTCAAATACCTCGTACCCCATAAGACACAGAATACCTTAGGATTGTATGCTCACACAGACAGTTCATATTTCACCATAATACATCAGAATAACGTGGCAGGTTTGCAAGTTAAGCTAAAAACTGGTGAATGGGTCGATACTGATCCCTCACACTGTATGTTTGTGTTCCTAGCAGGCGATGCATTAAAGGTTTGGAGTAATGATAGAATACAATCTTGTGAACACCGAGTCATTATGTGGGAAGAGAAGGAGAGGTACTCCATGGGATTACTTTCGTACAATCGCAAGAAGGTTCAGACACATGAAGAGATGATTGATGAAAAACATCCATCACGATATAAAGAATTTAACCATTATGAATATATAAATTTGCGCAGCAAGTTTCCCCCGCAGGAGGAAATTTCAAATTTTATTCTACTGTGA 1017 0.3933 MTRHGTSFSNSNILEHFVGDWRNIEKMGSLTVSQIPIIDFSDENMKPGTDTWFSASQVLRSAVESHGCFYAMTNEISMELFNSVFALMKELFDLPLETKNQKTSEKPNHGYYPRIPKAPLYESVGIDLDGSTNEEAIQMFANKMWPKGYDHFCEAINLYAKLLVEMDRTAKRLLFDAYGLDKRDCDSLLESTNYMFRSFKYLVPHKTQNTLGLYAHTDSSYFTIIHQNNVAGLQVKLKTGEWVDTDPSHCMFVFLAGDALKVWSNDRIQSCEHRVIMWEEKERYSMGLLSYNRKKVQTHEEMIDEKHPSRYKEFNHYEYINLRSKFPPQEEISNFILL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1896 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 35 113 IPR026992 -
Prci12g1896 338 SUPERFAMILY Clavaminate synthase-like 29 324 - -
Prci12g1896 338 Gene3D - 9 326 IPR027443 -
Prci12g1896 338 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 28 326 - -
Prci12g1896 338 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 35 321 - -
Prci12g1896 338 Pfam 2OG-Fe(II) oxygenase superfamily 200 286 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1896 Prci-Chr12 36558732 36560736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1896 25 319 Glycosyltransferase AT5G59530 23.779 3.40e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1896 - - pcin:129287422 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1896 12 36558732 36560736 Prci12g1896 12 36558732 36560736 ECH