Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1883 ATGCGTTTCTTGTCTCTTTCTCTTCCTGTTTGCTTGGCTCAGTGCACCAACACTTCTATGGCGTCCGGTTCGGCTTCTCTAATGTGGTTCCGAAAGGGTCTTAGGATCCATGACAACCCGGCTCTGGATTTCGCCCGCCAGGGGTCGGATCGTCTTTACCCGGTCTTCGTTATCGACCCGCATTACATGGAGCCCGATCCCGGCGCATTTTCCCCCGGGTCTACGCGAGCTGGTCTGAACCGGATTAAGTTCTTGCTTGAAAGCCTTGTGGACCTTGATGTGAACCTTAAGAAGCTCGGATCACGATTGCTGATTCTTAAGGGTGAGCCAGGGCAGGTTCTGATTCATTGCTTGAAGGAGTGGAACATCAGAAAGCTTTGCTTTGAGTATGACACTGATCCATATTATCGGGCTTTAGACACTAGAGTTAAGAACTATACGATGGCCTCTGGAGTTGAGGTTTTTTCTCCTGTGAGTCACACGCTCTTCAATCCAGCGGATATTATACAGAAGAATGGAGGGAAGCCACCCCTCAGTTATCAATCGTTTGTGAAGATTGCTGGGCAACTGACAATTCCTCTATCAAATACGGTTTCCTCACTTCCTCCCGTCGGACATCTCGGAAATTGTGAGATTTCTGAAGTTCCAACAATTGAAGAACTCGGATACGGAAACGTCAAACAGGAAGAATTCTCTCCTTTCAAAGGTGGTGAATCAGAAGGATTGAAGAGGCTGACAGAATGCATGAAAGAAAAGGAGTTCGTGGCCACCTTTGAGAAACCCAAGGGTAATCCATCTGCTTTTCTGAGGCCAGAAACAACTGTTCTATCACCTTATTTGAAATTTGGTTGTTTATCCTCCAGATATTTCTACCATCAGATTCAAGATGTATATAAAACTATGCCAAAGCATACGTCACCACCTGTTTCTCTTCTAGGACAGTTGTTATGGCGAGACTTTTTCTACACCACGGCATTTGGGACTCCAAATTTTGATAGGATGAGAGGTAATAGAATATGCAAGCAGATCCCTTGGAAGGATGATGACAAACTTCTGGAAGCTTGGAGGGAGGCTAGGACCGGATTTCCTTGGATTGATGCCATCATGGTTCAGCTACGCCAATGGGGTTGGATGCACCATCTAGCACGACATTCTGTTGCATGTTTTCTTACTCGTGGTGACCTGTTTGTTCATTGGGAGAAAGGGCGTGATGTCTTTGAGAGGCTTCTTATTGATTCAGATTGGGCAATTAATAATGGAAACTGGCTTTGGCTCTCTTGTTCATCCTTCTTTTATCAGTATAATCGTATTTATTCCCCAATCTCATTTGGTAAGAAGTATGACCCTAAAGGAGATTACATCAGGCATTTTCTCCCTGTCTTAAAAGATATGCCCAAGGAATACATTTATGAACCATGGACTGCTCCTCTCAGCGTTCAGAAGAAAGCAAATTGCATTATAGGCAAAGACTACCCCTTGCCAGTTGTTTCTCATGATTATGCGAGCAATGAGTGCCGAAGAAAAATGGCTGAGGCATATGCGTTGAACAAAGAATTGAATGATTCAATAAGCGAAGAAGATCTGAAAAATTTGAGGAGGAAACTAGAGGAAGGTCCACAAGAGCAAGAGACTAAACATAAAAGATATAGACAGAAGCTGATCGGGTGA 1668 0.4424 MRFLSLSLPVCLAQCTNTSMASGSASLMWFRKGLRIHDNPALDFARQGSDRLYPVFVIDPHYMEPDPGAFSPGSTRAGLNRIKFLLESLVDLDVNLKKLGSRLLILKGEPGQVLIHCLKEWNIRKLCFEYDTDPYYRALDTRVKNYTMASGVEVFSPVSHTLFNPADIIQKNGGKPPLSYQSFVKIAGQLTIPLSNTVSSLPPVGHLGNCEISEVPTIEELGYGNVKQEEFSPFKGGESEGLKRLTECMKEKEFVATFEKPKGNPSAFLRPETTVLSPYLKFGCLSSRYFYHQIQDVYKTMPKHTSPPVSLLGQLLWRDFFYTTAFGTPNFDRMRGNRICKQIPWKDDDKLLEAWREARTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPKGDYIRHFLPVLKDMPKEYIYEPWTAPLSVQKKANCIIGKDYPLPVVSHDYASNECRRKMAEAYALNKELNDSISEEDLKNLRRKLEEGPQEQETKHKRYRQKLIG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1883 555 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 24 162 IPR006050 -
Prci12g1883 555 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 23 207 IPR036155 -
Prci12g1883 555 MobiDBLite consensus disorder prediction 535 555 - -
Prci12g1883 555 FunFam Cryptochrome-1 329 552 - -
Prci12g1883 555 Gene3D - 160 327 - -
Prci12g1883 555 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 226 515 IPR036134 -
Prci12g1883 555 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 329 554 - -
Prci12g1883 555 Gene3D HUPs 20 159 IPR014729 -
Prci12g1883 555 Pfam DNA photolyase 26 187 IPR006050 -
Prci12g1883 555 PANTHER CRYPTOCHROME 25 516 IPR002081 -
Prci12g1883 555 Pfam FAD binding domain of DNA photolyase 313 510 IPR005101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1883 Prci-Chr12 36382701 36386625 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1883 K02295 - gmx:100780347 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1883 12 36382701 36386625 Prci12g1883 12 36382701 36386625 ECH