Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1877 ATGTGGCGGAGACTTGTCTCTTCTCACCTCAAATCCCTAGCTACACTCTCTGCTCCTCCTTCCCGATCTGCTCCCATCGCTGCCCGATTCACTCTCCACAATTCTTCCTGTCTTTCTCCATCGTCCTATTTCCTCAGCCGCCACTTCAGCACCGAGTCTGGGGATAATGTGGTTAAAAAGAAGGTTGAGGATGTAATGCCTATTGCTACTGGGCATGAGCGCGAGGAGCTTGAGGCCGAGCTTGAGGGAAAGAAGCTTCTTGATATAGACTATCCCGAGGGTCCTTTTGGGACAAAGGAAGCACCTGCTGTTGTAAAGTCTTACTATGACAAGAGAATAGTTGGATGCCCAGGAGGTGAAGGTGAGGATGAGCATGATGTAGTCTGGTTTTGGCTGGAGAAAGACAAGCCTCATGAATGTCCAGTTTGCTCTCAGTATTTTGTGCTTGAAGTGGTGGGACCTGGTGGACCACCTGATGGTCATGGCGATGATGAAGACGAACACCATTGA 510 0.4961 MWRRLVSSHLKSLATLSAPPSRSAPIAARFTLHNSSCLSPSSYFLSRHFSTESGDNVVKKKVEDVMPIATGHEREELEAELEGKKLLDIDYPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCSQYFVLEVVGPGGPPDGHGDDEDEHH 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1877 169 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 57 156 IPR002124 GO:0005740|GO:0005751|GO:0006123
Prci12g1877 169 FunFam Cytochrome c oxidase subunit Vb 58 152 - -
Prci12g1877 169 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 169 IPR002124 GO:0005740|GO:0005751|GO:0006123
Prci12g1877 169 Pfam Cytochrome c oxidase subunit Vb 69 155 IPR002124 GO:0005740|GO:0005751|GO:0006123
Prci12g1877 169 SUPERFAMILY Rubredoxin-like 59 155 - -
Prci12g1877 169 Gene3D Cytochrome c oxidase, subunit Vb 58 152 IPR036972 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1877 Prci-Chr12 36344490 36348813 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1877 K02265 - tcc:18595775 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0994 13 8394538 8398204 Prci12g1877 12 36344490 36348813 CCT
Prci12g1877 12 36344490 36348813 Prci13g0994 13 8394538 8398204 ECH
Prci12g1877 12 36344490 36348813 Prci12g1877 12 36344490 36348813 ECH