Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1872 ATGAGCAGGCCAGGAGACTGGACGTGCAGGTCATGCCAGCATCTGAATTTTCAGAGGAGGGACATGTGTCAGAGATGTGGAGATTCCAAGTATGGAGATTTTGGGTATGGAGGAGTAAGAATGACAACGACGACGATGGGGTCTTCATCATTTGGGTTTAACAGTACTGCAAGTACTGGTTCTGATGTTCGTCCCGGTGACTGGTACTGTTCTGCTGGAAGCTGTGGAGCACATAACTTTGCTAGCCGATCAAGCTGCTTCAAGTGTGGTGCTTTCAAAGATGACTTTGCTTCTGCCTTCTCCACCAATGATTTCTCTTGTTCTAGACCTTTTGGTGCTGCCTCTTCTAGACCTTCATGGAAATCTGGCGACTGGATATGCAACAGGTCAGGGTGCAATGAGCACAACTTTGCTAGCAGAATGGAATGCTTTAAATGCAGTGCCCCAAGGGACACGTACTAG 462 0.4784 MSRPGDWTCRSCQHLNFQRRDMCQRCGDSKYGDFGYGGVRMTTTTMGSSSFGFNSTASTGSDVRPGDWYCSAGSCGAHNFASRSSCFKCGAFKDDFASAFSTNDFSCSRPFGAASSRPSWKSGDWICNRSGCNEHNFASRMECFKCSAPRDTY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1872 153 PANTHER ZINC FINGER PROTEIN 60 151 - -
Prci12g1872 153 SMART zf_4 66 92 IPR001876 -
Prci12g1872 153 SMART zf_4 123 149 IPR001876 -
Prci12g1872 153 SMART zf_4 5 29 IPR001876 -
Prci12g1872 153 Gene3D - 114 152 - -
Prci12g1872 153 Gene3D - 56 95 - -
Prci12g1872 153 Gene3D - 2 32 - -
Prci12g1872 153 FunFam Ran-binding zinc finger protein 115 152 - -
Prci12g1872 153 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Prci12g1872 153 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Prci12g1872 153 SUPERFAMILY Ran binding protein zinc finger-like 58 95 IPR036443 -
Prci12g1872 153 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Prci12g1872 153 SUPERFAMILY Ran binding protein zinc finger-like 115 151 IPR036443 -
Prci12g1872 153 ProSiteProfiles Zinc finger RanBP2 type profile. 64 95 IPR001876 -
Prci12g1872 153 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
Prci12g1872 153 Pfam Zn-finger in Ran binding protein and others 121 150 IPR001876 -
Prci12g1872 153 Pfam Zn-finger in Ran binding protein and others 64 91 IPR001876 -
Prci12g1872 153 ProSitePatterns Zinc finger RanBP2-type signature. 125 146 IPR001876 -
Prci12g1872 153 ProSitePatterns Zinc finger RanBP2-type signature. 68 89 IPR001876 -
Prci12g1872 153 ProSiteProfiles Zinc finger RanBP2 type profile. 121 152 IPR001876 -
Prci12g1872 153 FunFam Ran-binding zinc finger protein 58 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1872 Prci-Chr12 36305505 36307275 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1872 - - gmx:100499847 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1872 12 36305505 36307275 Prci12g1872 12 36305505 36307275 ECH