Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1811 ATGGAGATTGAAACACGTGTTACCACTATCAATAGCAATGAGCAATCTGACCCTGAAACACTGCCCAGCAAGTGTAGGAGAAAGAAGTCTATTGTGTGGGAACACTTCACAGTAAAAGCTGTTGGAGATGGCATTACTAGGGCTTACTGTAAACAGTGTAAAAAATCATTTGCTTATATTTCTGGTTCAAAAGTTTCTGGCACAAGTCATCTGAAACGACACATTGCCTTGGGAATCTGTCCAGCAAATCGACAGAAAAATCAGCAAAGTCCACTTTCAAAAAACTTGAGTTCTGGAGATACGGCTCCACCAAAGAAACGTGTAAGAGCAACCTCTGGATTGGGTGTAATCCCATTTGATCAGGAACGTTGCAACAGTGAGATGGCTAAGATGATAATTGCGCAAGATTATCCACTTCAGATTGTGGAACACAAGGGTTTCATTGATTTTGTACGGACTCTCCAGCCCCAGTTCAATGCACTAAGCTCTACTCATGTTCATGGGGATTGCATTTCAATGTACCTCAGTGAGAAGCAAAACCTCTCAAAACTTATCAGAGAAATTCCTGGACGGGTCAACCTGACCTTGGATTTATGGACTTCAAACCAGACAGTGGGTTATGCTTTTCTTCGTGGACATTTCATTGATGCTGGTTGGAATGTACATCATCCTGTTCTTAACGTGATCACGGTGCCATTTCCTGATTCTGATGATTCCTATAATAAAATGATTGTGACTTGCCTTACTGATTGGCACTTGGAGGGTCGGGTATTTACACTTGCACTTGATCAGTCCTCAAATGAGACTGTGTTGGGAAATCTTAGAGGACTCCTTTCTGTTAGGAATCCTTTGATTTTCAATGGCCAGTTACTAAGCAGGAATTGTTTTGCTCGGATTCTTAGTCGTCTTGCTCTAGATGCGCTATGGGCAATGAGAGACACCATTAGCAAAGTGCGAGAGTGTGTGAAGTTAGTGAAAATTTCAAAATCTAACGAAGCGAAGTTCATTAAGCTGAGGCAACAACTCCAAGTCCCTAGTACAAAAGACCTTTTTATTGATAACCAAACTAAATGGGACACGACTTACCATATGCTGGTCGCGGCCTGTGAATTAAAGGAAGTTTTTGCTTGCTTTGAGACCCCTGGCCATGATTACAGAATGCCTTTGTCTATGGGTGAATGGAAGGAAGTAGAAATTCTCTGCACATATTTGAAGCAGCTATATGATGCAGCTAATCTTCTAACTTGCCAACCATACCCAACCGCAAACTTATTTTTCTCTGTAGTGACCGATCTTCTGGTGGAGTTGACTCATGCAGCTTTCAGCCAGGATCCCTTCCTCAGTAATTTGATTAGGCCTTTGCAAGAGAGGTTTGATCAATATTGGAGAGAAAGTTGCCTCGTCTTGGCAGCTGCTGTAGCCATGGACCCAAGGTATAAAATGGAGTTTGTGGAATTAACCTTTTGTCAGATCTTTGGTGAGAATGCTGAGCCATGGGTTAGGGTTGTTGAGGATGGTCTTCACGAACTCTTGCATGAATATATTGTAGAACTTCTTCCTTTGACAACTACAGATGCAAATGAAGGGAATGAGATTATGATTAAGACAGAGCCATGTCAAGAAGGGTCTATTGATGGAAATGAGATTATGATTAAGACAGAGCCATATCAAGAAGGGTCTATTGATGGATCTCTTTTCATAGATACAGATGGATTATCAGACTTAGAAATATATATCTCTGATCTTACCAGTAACCAAATCAAGTCAGAGTTGGATCAATATCTGGAAGAGCCTCTGCTACCCAGAGTAGAAGAATTTGACATTCTGAGTTGGTGGAGACTAAACAGATCAAATTACCCCACTTTGGCTAGAGTGGCATCTGATATTTTGTCTATGCCATTATCTACTCTCTCTGCAGAGTCTGTTTTTGACACAGAAACTAGAAAAATGGATAGCTACCGCAGTTCATTAGGTTCTACGACTATCGAGGCACTTTTTTGTGCCAAGGACTGGTTACATCATCAATCATTATCTAATTCCAACGCACTAATGGAAATGAGATTTTGA 2067 0.4107 MEIETRVTTINSNEQSDPETLPSKCRRKKSIVWEHFTVKAVGDGITRAYCKQCKKSFAYISGSKVSGTSHLKRHIALGICPANRQKNQQSPLSKNLSSGDTAPPKKRVRATSGLGVIPFDQERCNSEMAKMIIAQDYPLQIVEHKGFIDFVRTLQPQFNALSSTHVHGDCISMYLSEKQNLSKLIREIPGRVNLTLDLWTSNQTVGYAFLRGHFIDAGWNVHHPVLNVITVPFPDSDDSYNKMIVTCLTDWHLEGRVFTLALDQSSNETVLGNLRGLLSVRNPLIFNGQLLSRNCFARILSRLALDALWAMRDTISKVRECVKLVKISKSNEAKFIKLRQQLQVPSTKDLFIDNQTKWDTTYHMLVAACELKEVFACFETPGHDYRMPLSMGEWKEVEILCTYLKQLYDAANLLTCQPYPTANLFFSVVTDLLVELTHAAFSQDPFLSNLIRPLQERFDQYWRESCLVLAAAVAMDPRYKMEFVELTFCQIFGENAEPWVRVVEDGLHELLHEYIVELLPLTTTDANEGNEIMIKTEPCQEGSIDGNEIMIKTEPYQEGSIDGSLFIDTDGLSDLEIYISDLTSNQIKSELDQYLEEPLLPRVEEFDILSWWRLNRSNYPTLARVASDILSMPLSTLSAESVFDTETRKMDSYRSSLGSTTIEALFCAKDWLHHQSLSNSNALMEMRF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1811 688 MobiDBLite consensus disorder prediction 85 100 - -
Prci12g1811 688 ProSiteProfiles Zinc finger BED-type profile. 27 87 IPR003656 GO:0003677
Prci12g1811 688 Pfam hAT family C-terminal dimerisation region 590 672 IPR008906 GO:0046983
Prci12g1811 688 SMART bed5 27 83 - -
Prci12g1811 688 PANTHER BED FINGER-RELATED 168 677 IPR045259 -
Prci12g1811 688 MobiDBLite consensus disorder prediction 1 23 - -
Prci12g1811 688 SUPERFAMILY beta-beta-alpha zinc fingers 30 76 IPR036236 -
Prci12g1811 688 SUPERFAMILY Ribonuclease H-like 179 673 IPR012337 -
Prci12g1811 688 MobiDBLite consensus disorder prediction 1 19 - -
Prci12g1811 688 Pfam Domain of unknown function (DUF4413) 418 514 IPR025525 GO:0003677
Prci12g1811 688 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1811 Prci-Chr12 35896044 35901135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1811 - - gmx:106796308 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1811 12 35896044 35901135 Prci12g1811 12 35896044 35901135 ECH