Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1801 ATGGCGCCGAGGACTGGGAGGGGGAAATCGAATAAAGCCAAGACAGAGAGGAAGAAGAAGGAAGAGAAAGCATCCGTGCCTTCTCTGGTGGACATTTATGTCGTCACTCCTTATGATTCTCAAGTTCTCCTCAAGGGCATCTCTACTGATAAGATACTTGATGTGAGAAGGCTAATAGCTGTGAATGTGGAAACCTGCCATTTTACAAATTATTCTTTATCTCACGAGGTTAAAGGGCAGAGATTGAATGACAGGGTAGAGGTTGTTGCTCTAAAGCCATGTATTCTAAAAATGGTTGAAGAGGATTACATAGAGGAAGCCCAGGCTATTGCACAAGTGAGGCGACTCTTGGATATCGTGGCCTGCACATCCAGGTTTGCGAAGCCTAGACGGGCCTTGACAAGCCCAGACTCCAAAGCTAAGAAAAATAGTAAGGCCCAACAAAATCAGAAGCATAATTCGGGCCCACCAACTACGCCCAATGGGGAATTCCAGATCGGATCGCCGGTCACGGTTTCGCCGATCTCCGATAATATAGGCATGGTAGCCATTCATCCCACGCCGAAGCTTTCAGATTTCTACGAGTTCTTCTCTTTCTCTCATCTGTCTCCTCCGATTTTACACTTGAAGAGATGTGAACTGAAGAATCAGGATGATAGACGCAAAGAAGATTACTTTAAGCTTCAGATTAAAATCGGCAACGGGAAACTGATAGAAGTGATTGCATCAGAAAAAGGGTTTTATAATGTGGGGAAACAGTTTCTTCAGAGCCATGCTTTAGTTGATCTTCTGAAACAGCTCAGCCGAGGTTTTGCTAATGCATATGGATCTTTGATGAAAGCATTTGTGGAGCATAATAAGTTTGGTAATCTTCCATATGGATTTCGAGCAAATACATGGCTTGTTCCTCCATCTGTTGCCGAGAGTCCTTCCAATTTTCCTGCCCTACCTACTGAGGACGTAAGCTGGGGTGGTAATGGCGGTGGCCAGGGTAGAAATGGTGAATACAATCTTAGACCATGGGCTACAGACTTCGCAATATTGGCTTCTCTACCTTGCAAAACCGAAGATGAGAGGGTGGTCAGAGACAGAAAAGCTTTTCTGCTTCACAGTCTATTTGTCGATACCTCCATATTTACAGCTGTTGCAGCTATAAGACAGGTCATAGAGTCAAACTCCAATGGAAATAGCAAATTGCATTGTTCCCCGGACTCAATCCTGCATGAAGATCACTTGGGGGACTTGTCCATTGTAGTCAAACGTGATATAGGAGACACAAATCATAAGTATGATATGAAACTTTCTAGTGGGGAGTCCACAGTGTTTAAAGAAGGTGCTCAAAAGAATTTACTCAAAGGGTTGACTGCAGATGAAAGTGTAATTGTCCGTGATACTTCTTCTTTGGCCGTGGTTGTTGTACACTACTGCGGATACGTTGCAACGGTAAGTGTGGTGGGCAAGGGTAACATTAACACAAGGAAGCCTGAATTTCAAGATATTGAAATCGATGATCAGCCAGGTGGAGGGGCAAATGCGCTCAATGTCAATAGCTTGAGGCTACTGCTTCACAAGTTTGGAGCTGAGCCATCTGAAGGGAGATCATCACTACCAAATTTGGATGATTTAGACTCTTCCAGAAATCTTGTTCGGAAGGTGGTTAAAGAAAACTTGGAAAATAAAAGTGAGGAGCCAGTTAATTCAGAAAGTTCTATTCGGTGGGAACTCGGTTCTTGTTGGTTGCAACATCTGCAAAAGCAGGAAACTTCAACAGATAAAAGTTCTGAAAAAAAGGACAACGGCAATGAAGTTGTACAAGCTGTCAAAGGTCTTGGAAAGCAATTCAAATTTTTGAAGAGGAGGGAAAAGAAACCAACTAGTTTAGATTGTACAGACCATAGGGAGCATAATGACTCTAGACCTTCTGCTGCGGCAACTGTTAAAGCTGAATTAAACAATGATGACTTAAATAGCTCCACTGAATTGGAGAAACTAACTTCAGTAGAAGCATTTTTGCGACTGAAAGAATCTGGAACTGGTCTGCATCTAAAGACAGTTGATGAGCTTATCAACATGGCACACAAGTACTATGACGAAATTGCCTTGCCAAAGCTGGTTACAGACTTTGGATCACTTGAGCTTTCTCCAGTTGATGGCCGTACACTAACTGATTTCATGCATTTAAGAGGATTAAAGATGCGCTCCCTTGGTGAAATAGTTAAACTTGCAGAAAATCTTCCACACATACAATCTCTTTGTATTCATGAGATGGTTACTCGAGCTTTCAAGCATTTACTCAAAGCTGTGATTGCCTCAGTTGATAATGTAGCAGACTTATCTCCTGCTATTGCATCAACACTGAATTTCTTACTTGGAAGCTGTCAATTGGAAAATGCTGACCAAAGTTTGACTGAAGACAATCATCTCAGATTGCAGTGGCTAAGGGTATATTTAATCAAAAAATTTGGATGGACATTAAATGATGAATTTCAACATTTGAGGAAGTTATCAATCCTGAGAGGGCTTTGTCATAAGGTTGGAATGGAGTTGTTCCCAAGAGATTATGATATGGAGACCCCCAATCCATTTGGGAAATATGATATTATCAGCCTAGTTCCTGTTTGCAAGTTCGTAGGATGCTCCTCAGCAGATGGACGCAATTTGTTGGAATCATCCAAAATGGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTGAATTATGGAACAAAGGCACTGGCAAAGATGATGGCTGTTTGTGGTCCCTATCATCGAACTACTGCAAGTGCTTATAGTCTTTTAGCTGTGGTTCTCTACCACACTGGAGATTTTAATCAAGCAACCATATATCAGCAAAAGGCCCTGGATATAAATGAGAGGGAACTTGGGCTTGACCATCCAGACACAATGAAAAGCTATGGGGATCTCTCTGTCTTTTATTATCGTCTGCAACACATGGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTCTTCCTTCTTCACTTCACATGTGGTCTATCTCATCCGAACACAGCTGCAACATACATAAATGTGGCTATGATGGAAGAGGGTATGGGAAATGTTCATGTGGCACTCAGATATTTGCATGAAGCTCTTAAATGCAACAAAAGATTGCTAGGAGAAGATCATATCCAGACTGCCGCAAGCTTCCATGCCATTGCCATAGCTCTTTCATTGATGGAAGCATATTCCCTGAGTGTACAACATGAACAAACGACCCTTAAGATACTTCAAGAAAAGCTTGGACCTGAAGATCTTCGTACACAGGATGCTGCTGCATGGCTCGACTATTTTGAATCAAAAGCAATAGAGCAACAAGAAGCGGCTAAAAATGGAACTCCAAAGCCAGATGCATCCATTGCAAGCAAAGGTCACCTTAGTGTATCAGATCTTCTGGATTTTATTAATCCTGAACAAGAGCCAAAAGGAAATGACACTCAGAGGAAACCGCGGCGTGCAAAGCAGATACACCCAATAATTGATAAAAGCCAAGAACACGATGATTCAATAGCTGACGAGAACATTCCATTTCATGGCTCAAAAGATGATAAGAGTGTCGAAGAAGGCAACGTTCAAGAAACAAAAGTCATGCTTCATTCTAAAGAACTGAAAAAAAATGGTGAATTCACCAGGTATGTGCATGAGACAAGTGAAGTTGTTGAGGAAATATCCTCCGATGAAGGGTGGCAAGAAGCCAGTTCTAAAGGGCGGTCAGGAAACACAGCCAACCGCAAGTATGGTAGGAGGAGACCTCTTGTTGCAAAGCTGAAGATTAATAGCTCTGAGAATTACATAGTCAGAGAAAGCAGTTACAGGAATGACATTACATCACCGCATAAAGGGACTCCAAAAAACACTTCAGTCACACCACTTTCACCTGGACAATCAAAAGCTAGAAGCTTCACTTTAAAAAATGAACCTTTCAATAATTCAACAAGAGCTTCGGTTTCCAAAACTTCCTCTACTCCTGCAGCTCTTAGTCCCTTGGCTTCAAAGTCTATATCTTACAAAGAAGTGGCTTTGGCACCACCAGGTACTGTTTTAAAGCCCCTGCTAGAGAAAGCTGAAGTAGACAATGTAAATACTGAAACCGAGAAGTGCAACAAAGTTGAAGAAAGCTGCCAAAATTCTATTGCTGAAGCAGTTTCTGAGCAAGATAAAAAGGAGGCGACCTGTGAACCTGACATTCAAAGAGAAGATTCTGCATCAGAACTTGAGGATCGGTCCCTCTCTTCTGATCAGGCAAAAGCTGCAGAAACCAATGGTAGTAAGCTTTCAGCTGCAGCCGAACCATTCAACCCAGGAATGTTGTTTATGCCTCACCATATAAACTCGGTTCCCATCCCAAACATTTATGATGCAAATGCTCGTCAAGGCATGCTTGTGGATCCCGTGCTTCCTCCTGTTGCTGCTAGGGTCCCCTGTGGGCCCAGATCACCTCTATACTATAGAACCAACTATACTTTTCGCATGAAAAACGGTCATTCAAAAAATCACACTCCGATCGGGGAAAGAAGTGGATTTGAGGCTCCAAGAATCATGAATCCTCATGCACCCGAGTTTGTTCCCAGAAAAGCTTTGCAAACGGAGACCAATGACGCCAATTCCTTTGAATCAAGTATGGTAGAAAACAACAACGTAGATGAAAAAATGAGCAAGGATTTGAAGGGAAGTTCCCCAAGAAAGCGTGTTTCTGGATCTGAGAAGTCAGAGTTGGCTCGGCAGATACTGCTTAGCTTGCTGGTGAAATCAGTTCGGCAAAATATTGATTCTGTCGATGAATCCAAAGTCAGTGACGAAAAAAGCGAGAACTTGGAAAACTCTTCTGATGCAGTAGCCAAAGACAGTGCTATTATAAAAATCCTGTATACCAACGAAGAAAAAAGTAAGATGACTCCCCTGTCAAACGGAAGGGAAGAGCAAGAAAACATAAATGTAACCAATAAAAACATCGGAGATGAAGGGTTTATAGTTGTCACTAGGAAAAGAAAGAGCAGGCAGAAGTTCACAAAAGGAGTGTCAGATTTGTGCAATCAGCAGTCCATCTGTGCTTCAGTCCGTTGA 5079 0.4229 MAPRTGRGKSNKAKTERKKKEEKASVPSLVDIYVVTPYDSQVLLKGISTDKILDVRRLIAVNVETCHFTNYSLSHEVKGQRLNDRVEVVALKPCILKMVEEDYIEEAQAIAQVRRLLDIVACTSRFAKPRRALTSPDSKAKKNSKAQQNQKHNSGPPTTPNGEFQIGSPVTVSPISDNIGMVAIHPTPKLSDFYEFFSFSHLSPPILHLKRCELKNQDDRRKEDYFKLQIKIGNGKLIEVIASEKGFYNVGKQFLQSHALVDLLKQLSRGFANAYGSLMKAFVEHNKFGNLPYGFRANTWLVPPSVAESPSNFPALPTEDVSWGGNGGGQGRNGEYNLRPWATDFAILASLPCKTEDERVVRDRKAFLLHSLFVDTSIFTAVAAIRQVIESNSNGNSKLHCSPDSILHEDHLGDLSIVVKRDIGDTNHKYDMKLSSGESTVFKEGAQKNLLKGLTADESVIVRDTSSLAVVVVHYCGYVATVSVVGKGNINTRKPEFQDIEIDDQPGGGANALNVNSLRLLLHKFGAEPSEGRSSLPNLDDLDSSRNLVRKVVKENLENKSEEPVNSESSIRWELGSCWLQHLQKQETSTDKSSEKKDNGNEVVQAVKGLGKQFKFLKRREKKPTSLDCTDHREHNDSRPSAAATVKAELNNDDLNSSTELEKLTSVEAFLRLKESGTGLHLKTVDELINMAHKYYDEIALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMRSLGEIVKLAENLPHIQSLCIHEMVTRAFKHLLKAVIASVDNVADLSPAIASTLNFLLGSCQLENADQSLTEDNHLRLQWLRVYLIKKFGWTLNDEFQHLRKLSILRGLCHKVGMELFPRDYDMETPNPFGKYDIISLVPVCKFVGCSSADGRNLLESSKMALDKGKLEDAVNYGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHMELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILQEKLGPEDLRTQDAAAWLDYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFINPEQEPKGNDTQRKPRRAKQIHPIIDKSQEHDDSIADENIPFHGSKDDKSVEEGNVQETKVMLHSKELKKNGEFTRYVHETSEVVEEISSDEGWQEASSKGRSGNTANRKYGRRRPLVAKLKINSSENYIVRESSYRNDITSPHKGTPKNTSVTPLSPGQSKARSFTLKNEPFNNSTRASVSKTSSTPAALSPLASKSISYKEVALAPPGTVLKPLLEKAEVDNVNTETEKCNKVEESCQNSIAEAVSEQDKKEATCEPDIQREDSASELEDRSLSSDQAKAAETNGSKLSAAAEPFNPGMLFMPHHINSVPIPNIYDANARQGMLVDPVLPPVAARVPCGPRSPLYYRTNYTFRMKNGHSKNHTPIGERSGFEAPRIMNPHAPEFVPRKALQTETNDANSFESSMVENNNVDEKMSKDLKGSSPRKRVSGSEKSELARQILLSLLVKSVRQNIDSVDESKVSDEKSENLENSSDAVAKDSAIIKILYTNEEKSKMTPLSNGREEQENINVTNKNIGDEGFIVVTRKRKSRQKFTKGVSDLCNQQSICASVR 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1801 1692 ProSiteProfiles TPR repeat profile. 926 959 IPR019734 GO:0005515
Prci12g1801 1692 Gene3D Tetratricopeptide repeat domain 885 999 IPR011990 GO:0005515
Prci12g1801 1692 Pfam Translation initiation factor eIF3 subunit 135 713 855 IPR033646 -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1227 1253 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1147 1194 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1141 1194 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 139 167 - -
Prci12g1801 1692 SUPERFAMILY TPR-like 892 995 IPR011990 GO:0005515
Prci12g1801 1692 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 881 1131 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1232 1246 - -
Prci12g1801 1692 ProSiteProfiles Clueless (Clu) domain profile. 319 594 IPR025697 -
Prci12g1801 1692 SUPERFAMILY TPR-like 963 1087 IPR011990 GO:0005515
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1 22 - -
Prci12g1801 1692 SMART tpr_5 1010 1043 IPR019734 GO:0005515
Prci12g1801 1692 SMART tpr_5 968 1001 IPR019734 GO:0005515
Prci12g1801 1692 SMART tpr_5 926 959 IPR019734 GO:0005515
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1534 1551 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1390 1418 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1390 1428 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1534 1574 - -
Prci12g1801 1692 Gene3D Tetratricopeptide repeat domain 1001 1119 IPR011990 GO:0005515
Prci12g1801 1692 MobiDBLite consensus disorder prediction 130 167 - -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1552 1574 - -
Prci12g1801 1692 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Prci12g1801 1692 CDD CLU-central 715 856 IPR033646 -
Prci12g1801 1692 MobiDBLite consensus disorder prediction 1274 1330 - -
Prci12g1801 1692 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 9 1417 IPR027523 GO:0006996
Prci12g1801 1692 Pfam Tetratricopeptide repeat 925 995 - -
Prci12g1801 1692 Pfam Tetratricopeptide repeat 1009 1083 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1801 Prci-Chr12 35809066 35821268 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1801 K03255 - gmx:100784276 2353.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1801 12 35809066 35821268 Prci12g1801 12 35809066 35821268 ECH