Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1798 ATGTCGAAGGAAGAAGCGTTCATTGGGTCGATTGACCAGGGAACCACAAGCACTAGATTCATCATCTACGATCGCTCTGCTCGTGCGATCGCTTCCCACCAGGTCGAGTTCACTCAGTACTATCCAGAAGCAGGATGGGTGGAGCATGATCCAATGGAGATCTTGGAGAGCGTCAGGGTTTGTATCACTGAGGCTCTCAAAAAAGCGAAGTCCGAGGGAATCAACGTCGTCGACGGATTGAAGGCAATCGGTGTAACCAACCAGAGGGAGACCACTCTACTTTGGAGCAAATCAACTGGAATTCCTCTCTACAACGCCATCGTTTGGATGGATGCTCGTACCAGTTCTGTTTGCAGGAAATTGGAGAACGAGTTATCTGGTGGCAGAACCCATTTTGTGGAGACTTGTGGTCTGCCTATCAGCACTTACTTCAGTGCCACTAAACTGCTGTGGCTGATGGAGAGTGTCGATGCTGTCAAGGAAGCAATAAAGAAAGGAGATGCTCTTTTTGGAACTATAGACACTTGGTTGATTTGGAATTTAACTGGCGGTGTGAACGGCGGATTGCATGTCACTGATGTTTCAAATGCATCACGGACAATGCTGATGAGTCTTAAAACTCTTGACTGGGATGCATCCACCTTAAAAACCCTCGGCATTCCGGCTCTAATTCTGCCCAAGATTATAAGCAATTCTGAAATCATTGGCAAGATTGCTTCCGGATGGCCAATCACTGAAATCCCAATTGCTGGGTGTTTAGGTGATCAACATGCTGCAATGGTAGGACAAGCATGCAGAAAAGGAGAGGCTAAAAGCACATATGGAACTGGTGCTTTCATACTCCTGAACACTGGTCAAGAGATAGTTCAGTCAACACATGGTCTTCTGACCACTTTAGCATTTAAGCTTGGTCCGAATGCTCCGGCAAATTATGCTCTGGAAGGATCAATTGCGATTGCTGGTGCTGCAGTGCAGTGGCTGAGAGATAGCCTTGGTATTATTAGTAGTGCTAAGGAGATAGAGGATCTGGCTTCACAGGTTGAGTCCACAGGTGGAGTTTACTTTGTTCCTGCTTTTAATGGATTGTTTGCTCCATGGTGGCGAGATGATGCTCGTGGGGTTTGTATTGGAATTACAAGGTTTACAAGCAAGGCTCACATTGCTAGAGCGGTGCTTGAGAGCATGTCTTTTCAAGTGAAAGATGTCTTGGATTCAATGAAGAAAGATTCTGAGGAAAACGATAAAGATAAGAAAGAAAAAGAAGAATTCTTGCTCAGAGTGGATGGTGGTGCCACTGTTAACAACCTTTTAATGCAGATTCAGGCAGACTTGTTGGGAAGTCCAGTGATCAGACCGGCCGACATCGAGACAACAGCGCTCGGCGCAGCCTATGCTGCTGGGCTAGCTGTCGGAGTTTGGACGGAAGAGGAGATCTTTGCTTCTGGTGAGAAGATGAAGACTTCTACTGTTTTTCATCCAGAGTTAGATGAGCAACCGAGGAAGAAGAAAGTGGAATCTTGGTGCAAAGCTGTGACCAGAACATTTGACTTGGCTGATCTCTCTCTTTGA 1569 0.4627 MSKEEAFIGSIDQGTTSTRFIIYDRSARAIASHQVEFTQYYPEAGWVEHDPMEILESVRVCITEALKKAKSEGINVVDGLKAIGVTNQRETTLLWSKSTGIPLYNAIVWMDARTSSVCRKLENELSGGRTHFVETCGLPISTYFSATKLLWLMESVDAVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMSLKTLDWDASTLKTLGIPALILPKIISNSEIIGKIASGWPITEIPIAGCLGDQHAAMVGQACRKGEAKSTYGTGAFILLNTGQEIVQSTHGLLTTLAFKLGPNAPANYALEGSIAIAGAAVQWLRDSLGIISSAKEIEDLASQVESTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMSFQVKDVLDSMKKDSEENDKDKKEKEEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAYAAGLAVGVWTEEEIFASGEKMKTSTVFHPELDEQPRKKKVESWCKAVTRTFDLADLSL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1798 522 PANTHER SUGAR KINASE 7 516 - -
Prci12g1798 522 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Prci12g1798 522 Gene3D - 264 517 - -
Prci12g1798 522 NCBIfam glycerol kinase GlpK 7 515 IPR005999 GO:0004370|GO:0006072
Prci12g1798 522 Gene3D - 2 262 - -
Prci12g1798 522 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016301
Prci12g1798 522 PIRSF GlpK 5 521 IPR000577 GO:0005975|GO:0016301
Prci12g1798 522 SUPERFAMILY Actin-like ATPase domain 265 515 IPR043129 -
Prci12g1798 522 FunFam Glycerol kinase 264 517 - -
Prci12g1798 522 FunFam Glycerol kinase 5 263 - -
Prci12g1798 522 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 469 IPR018485 GO:0005975|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1798 Prci-Chr12 35779336 35782518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1798 K00864 - tcc:18595334 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1798 12 35779336 35782518 Prci12g1798 12 35779336 35782518 ECH