Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1735 ATGGCTCTACTTCTCCAACTCAGAACGAGAACCAAAATGAATGCCTTCACAAGCCCTTCTATCTTCCATTACTTCTCTACCTTCAATTCCAACGACGATGATCCCGATTCTACCACTGCTTCCTCCGACGATCCTCCTTCTACAAACACTGATTCTCCCTTCTCTTCCTATTTCAGCGATGTCAAGAGGGCCCTGAAAGAGGGCAGTTCCTCTTCCTCGTTCACTTCGAGAAATCCCTCAAATTCATCTTCTGCTGCTTCCGGTTTCACTGCACCGAGGCCGTATAGAGCTGCATCGCTTGATGAAATCCGGAAGAACCTGTCCGAGTTCCGGCGTCGTCACCCGAGCTCAGATTCGACGCCTCCGTCTTCACCTCTCTCGAATCAAATCTCATTGCAGGAGATCTATAGGAGAAACATGGCTGGAAAACCGGGTGAATCGACGCCAAATGCTGATTTGAAGCCTCGTAAAATTGGAGGAAGACTTTCTTTCGATGCGATTCGTGAAAGCGTGCGGAATAGAGTGCAGAATGCTGCGCTCTCTGGAGGTGACATGAAAGACGGGGAGCTATCGTCGTTATCGGCATTTTCCCAGAGTTTAAGAAAGGAGCCTTCAGACTCCACTGGTTCTCGGACATCGTCGACGTTATTTGGGGGGACTGGTGAATTGCCAGCGTCGGTTTTCGGCAAGGAGTTGAGGGAGAAAGAGAGAAGGGAGGGATCCGATGAAATGAAGATGGAGTTTCTGAAGACATACAACTATGAGGAATTAGGAGAGAAATTGAGAAAATTGAGGCCGAAGCCAAAAGGAGGGGACTGGTTTTCTTTGAGGGAGTTGAATGATAGGTTGGTGAAATTGAGGGAAATGGAAGAGGAGGAGAATAAGCAATCACCCAGATCTTTTAATAAGGAACTTAGAGACATCATGATTCAAATGAAGGTTAATGAGAGCCAGGAAAAGAAAAGTATATTCCAGAGACTTGATATCTTGGGTGAGCTGGGCCGGACTCCAAGCTTCATGCTGCAACCTCCTAAAGAGAATCTTGTTGAGATGTACTTCCATCCAGATAACATGTCTTCAGCTGAAAAGTTGAAAATTGAGCTTGCAAGAGTGAGGGAGGAGTTTAAAATGTCCGAGTCAGATTGTGGATCATCTCGTGTTCAAGTTGCACAACTCACAATTAAGATTAAGCATCTGTCATCAGTTCTACACAAGAAGGATAAACATTCTCGTAAAGGCTTGGTAGCTATGGTTGAGAAGAGGAAAAGTTTACTGAAATACCTCAGAAGAACTGACTGGGATTCCTACTGTTTGGTGATTTCCAAGCTAGGTTTGCGTGATAATCCCAATACGAAGTACTGA 1362 0.4545 MALLLQLRTRTKMNAFTSPSIFHYFSTFNSNDDDPDSTTASSDDPPSTNTDSPFSSYFSDVKRALKEGSSSSSFTSRNPSNSSSAASGFTAPRPYRAASLDEIRKNLSEFRRRHPSSDSTPPSSPLSNQISLQEIYRRNMAGKPGESTPNADLKPRKIGGRLSFDAIRESVRNRVQNAALSGGDMKDGELSSLSAFSQSLRKEPSDSTGSRTSSTLFGGTGELPASVFGKELREKERREGSDEMKMEFLKTYNYEELGEKLRKLRPKPKGGDWFSLRELNDRLVKLREMEEEENKQSPRSFNKELRDIMIQMKVNESQEKKSIFQRLDILGELGRTPSFMLQPPKENLVEMYFHPDNMSSAEKLKIELARVREEFKMSESDCGSSRVQVAQLTIKIKHLSSVLHKKDKHSRKGLVAMVEKRKSLLKYLRRTDWDSYCLVISKLGLRDNPNTKY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1735 453 Gene3D - 413 448 - -
Prci12g1735 453 Gene3D - 364 411 - -
Prci12g1735 453 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 452 - -
Prci12g1735 453 MobiDBLite consensus disorder prediction 197 220 - -
Prci12g1735 453 MobiDBLite consensus disorder prediction 32 57 - -
Prci12g1735 453 Coils Coil 276 296 - -
Prci12g1735 453 CDD Ribosomal_S15p_S13e 370 444 IPR000589 GO:0003735|GO:0005840|GO:0006412
Prci12g1735 453 Coils Coil 361 381 - -
Prci12g1735 453 Pfam Ribosomal protein S15 371 446 IPR000589 GO:0003735|GO:0005840|GO:0006412
Prci12g1735 453 MobiDBLite consensus disorder prediction 32 95 - -
Prci12g1735 453 MobiDBLite consensus disorder prediction 197 222 - -
Prci12g1735 453 NCBIfam 30S ribosomal protein S15 370 446 IPR005290 GO:0003735|GO:0005840|GO:0006412
Prci12g1735 453 Hamap 30S ribosomal protein S15 [rpsO]. 358 447 IPR005290 GO:0003735|GO:0005840|GO:0006412
Prci12g1735 453 MobiDBLite consensus disorder prediction 65 89 - -
Prci12g1735 453 SMART Ribosomal_S15_2 368 446 IPR000589 GO:0003735|GO:0005840|GO:0006412
Prci12g1735 453 SUPERFAMILY S15/NS1 RNA-binding domain 368 447 IPR009068 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1735 - - pcin:129288156 801.971