Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1718 ATGCTGTGCAGGAAGGGTCTCCGGAACTGCGAATCAGGATCGGTGCCGGTGTACCTCAATGTGTACGATCTGACGCCGATCAACGGCTACGCTTACTGGTTCGGCCTTGGAGTCTACCATTCCGGCGTTCAAGTTCATGGTGTGGAGTACGCATTTGGAGCTCACGAGTACTCGTCGACGGGGATATTCGAAGGAGAACCAAGACGGTGCGAGGGTTTCGCGTTTCGGACGACGATACTGATCGGAAAGACGGAGAAGGGAGAGGAAGCGGTAAGGAGTGTGATGGAAGAGCTCGCCGGAGAGTACAGAGGGAATGCGTACAATCTCATCACCAAGAATTGCAACCATTTCTGCAACGATGCTTGCCTGAAACTCACCGGCAAACCTATTCCCAGTTGGATCAATCGACTTGCCAAAATCGGGTTCTTGTGCAAGTGTGTTCTTCCAGTGGCTATAAACTCAACCAGAGTTAGGCATCACAGAATTGAAGACAAACACTGTGAAGAGAAGCAAGAAGCAGCATCATCATCATCATCAACCAGTGTCCCTCTAAAAACATCCGATAAAATTATAACCATACAGATGCAGAGATCATCATCAACAAGTGAGACAAATAACAACAACAAGGTGGCACTTTCAAATTCAACATCTTCTCCACCATCACCTTCCCTGGCTTCTTCTACCTCCTCTGCAATAACCAGACCTGACCTTCCTCAACCTTCTTCACCTGTGATTATTGAGCCTTCTCCATCTCCATGTCCAAACTCTGAACATTAG 777 0.4801 MLCRKGLRNCESGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYAFGAHEYSSTGIFEGEPRRCEGFAFRTTILIGKTEKGEEAVRSVMEELAGEYRGNAYNLITKNCNHFCNDACLKLTGKPIPSWINRLAKIGFLCKCVLPVAINSTRVRHHRIEDKHCEEKQEAASSSSSTSVPLKTSDKIITIQMQRSSSTSETNNNNKVALSNSTSSPPSPSLASSTSSAITRPDLPQPSSPVIIEPSPSPCPNSEH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1718 258 SMART DUF862_2a 15 153 IPR008580 GO:0008233
Prci12g1718 258 ProSiteProfiles PPPDE domain profile. 15 152 IPR008580 GO:0008233
Prci12g1718 258 Pfam PPPDE putative peptidase domain 16 149 IPR008580 GO:0008233
Prci12g1718 258 MobiDBLite consensus disorder prediction 241 258 - -
Prci12g1718 258 MobiDBLite consensus disorder prediction 166 258 - -
Prci12g1718 258 Gene3D PPPDE domains 11 170 IPR042266 -
Prci12g1718 258 PANTHER DESUMOYLATING ISOPEPTIDASE 14 208 IPR008580 GO:0008233
Prci12g1718 258 MobiDBLite consensus disorder prediction 173 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1718 Prci-Chr12 34892841 34896214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1718 K22763 - pcin:129287895 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1718 12 34892841 34896214 Prci12g1718 12 34892841 34896214 ECH