Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1702 ATGGCTCCTTCTGACAATGAAGTGCTTCAAACTCTTGTGGATGTTGGGGATAGCCTTCTCAATCATCTCTCTTCCACTGATCAGCTTCTCGCTCTTCTTGATAAACTTGAGAATTTATTATCAACTTTGGACCAAGAACCAGATGAGGCAGTGAAAGAAGCGATTCTACCATCAATGAAGGCATTGATTTCCAGTGAACTTTTGAGGCATTCAGACGAGCATGTTAAGATTTCCGTTACATCTTGCATCGCTGAGATTACTAGAATAACAGCACCAGATTCCCCTTATGATGATGAACAGATGAAGGAAATTTTCATGCTCACCGTCAAAGCTTTTGAAAAGTTGTCTGATGTACCAAGCCATGGTTATGAAAAGGCACTTTTAATAGTTGATAATGTTGCAAGGGTCAGATCGTGCCTGCTGATGATGGACCTCGAGTGTGACGACTTGATCATTCAAATGTTTCAGATTTTCCTAAGAGTTATTAGCCCAAACCACCCTGAGGTTGTGACCTTTGCGATCGAAGCAATAATGACAATGGTCTTGAATGAGAGTGAAGAAATTTCCACTGATCTTCTTAGTCCAATATTAGATAGCCTGAGAAAGGAAAATCAGACAAATTCACCTATCTCTTGGTCATTGGCGGAGAAAGTTATTGCCAATTGTGCTGATAAGCTTCAGGCCTATCTTATGAGAGCAGTGCAGTCCACAGGCAGACCTCTGGATGCTTTTGCTGAAATAGTAGCTTCTATTTGCCAGAGAGGATCTGAAACTCTTCAGTGCAATCATTCTAATGATCCTAGAAACCCATTGGTTCAGGAAGATGAAAACGAGCTTTCTGTATGCAAAGGTTCAGATAAGCAATCCTGTGATGACCCGGAACCAGATATTGCTTGTGCAAGACAAGCTGAGACTATTGATGACGCCAAGCTGAACAAAAGAAATCCCAATTCTACTGCGGACAGTGAAATCATCAAAAAGAAAGCTGCAAATAGGCAACCTCATTCTGATCTCACTAAGAATGAGAAAAGAAACAACGCAAAAACCAATTTAGAAAATGGAAATTCGCAGTCAGTTGAAAAATCTAGTTCAGAAGCTGAGCTTGATGTTATGCCAAAGAAAAGGGGTTATAAACCTAATTCTTTAACAGATACAGAAGAAGGCTATGATCACTCTCAGATTTGTATGGACAGCAAATCCACAAAAGCTGTTCAATTCCAAAAGGCTGGCGACAGTGGCTGTTATTTACCACCTTCTGAGAGCCCTGCTTCCAGAAAAAATAATTTGCAGTTGGAGTCTGAAAATGTGGGTGAAGTTTTTCAAGCTAAAGTTGAGAAAACCATGAAACCCAAAAAGGCTCATGATAGAGGTACCGGTCTTCCACGTTCTAAAAACTCTGCATCCCAAAAGGATAAGTTGTTTCTGGAGCCTAAAATTGCTGGTGAACTTTCTCAATGTAAAACCAAGAAGAAATCCACAAAAACATCTCGAGTCAGAAAGGCTTGTGATGGTGATATTGAGCTTTCACCTCCTGCAAACCATAATTTGCTAAAGGATAATGTTCTGAAGAAATTTGAAAATAAAGGCTGTGAGGATCTAGTGTCTCAACATGGAACTGATAAGAATATTGATGCTGCTCACCCTTCAACAAATCAGAGCACTCCTGACAGTAGCCGTCGCAAAAGGGGTCGACCAAGAAAAAATAGCAATAATCAAGGTGCTAACCTGAGGTTTGTATCAACAACTGAGGAAGACCATTTGACTGCACTGCATGAGGATATTCCTTTGGAACCTGCTAGTCTGAGGTTGGAAAAGGATCGTGAAGTAATGAAAGATGCTGAAGTGAAAAATCGGGCACCTCTGAGGAAAATCAAAGTTGCTTCTAAGACTGATGAGAATACTGCTGTGGTTACTGAATCAATAGCTGGTGAGATGAGAGGTAAAACTTGTGAAGATGAGGAGAAAGCCACGCCAGTGGTGAATATAGAGACAACGAATGTAGAGGAGGATCAGGCCTTAACTCAAACAAATGTTAAGAAAAGGAGGAAGCTCGATGCTCTGCCTAATAAAGATGTCAATGATTTCTGTACTGTTAAGCTAACTGATTCTGTGGCTAAGAAACTCACTGGAGTTGAAGAAACCCCTCAAACAAGACCAAGGAGGAAGAGAACTGCTGGAAGTGTTGAGGCTGCTGAAATGCGTGACTGCAATGAACTTTCAGTTGGTAGCAGGATCAAGGTCTGGTGGCCAAAGGATAAGAGGTTTTATGAAGGTGTTGTTGATTCTTATGACTCTGCCAAAGGAAAGCACAAGATTTTATATGTTGATGGTGACGTGGAAGTATTAAACCTCAAAAAACAACGGTGGGAGCTTATTACGGATCATGTCCCCCTTGATGCAGATCAAGAAATTGATCTCCAACAGATTGAGCCAGTGACATCAGATATAGATGATACAAGAAAAGGAAATTCAGCATCCGGGTCAGCCAAAGGAGCGAAAACAATTGTCGCAGGACTAGGGGTAGAGCATCTGCTAGAATCTCCAAATCGGCTTCTGCAAAATCTGCTGGAAAATCTAAGCATGATTCCGCAGTTGATGAACCCATTGAGGCTGATGAATCTGCAGTAA 2628 0.4117 MAPSDNEVLQTLVDVGDSLLNHLSSTDQLLALLDKLENLLSTLDQEPDEAVKEAILPSMKALISSELLRHSDEHVKISVTSCIAEITRITAPDSPYDDEQMKEIFMLTVKAFEKLSDVPSHGYEKALLIVDNVARVRSCLLMMDLECDDLIIQMFQIFLRVISPNHPEVVTFAIEAIMTMVLNESEEISTDLLSPILDSLRKENQTNSPISWSLAEKVIANCADKLQAYLMRAVQSTGRPLDAFAEIVASICQRGSETLQCNHSNDPRNPLVQEDENELSVCKGSDKQSCDDPEPDIACARQAETIDDAKLNKRNPNSTADSEIIKKKAANRQPHSDLTKNEKRNNAKTNLENGNSQSVEKSSSEAELDVMPKKRGYKPNSLTDTEEGYDHSQICMDSKSTKAVQFQKAGDSGCYLPPSESPASRKNNLQLESENVGEVFQAKVEKTMKPKKAHDRGTGLPRSKNSASQKDKLFLEPKIAGELSQCKTKKKSTKTSRVRKACDGDIELSPPANHNLLKDNVLKKFENKGCEDLVSQHGTDKNIDAAHPSTNQSTPDSSRRKRGRPRKNSNNQGANLRFVSTTEEDHLTALHEDIPLEPASLRLEKDREVMKDAEVKNRAPLRKIKVASKTDENTAVVTESIAGEMRGKTCEDEEKATPVVNIETTNVEEDQALTQTNVKKRRKLDALPNKDVNDFCTVKLTDSVAKKLTGVEETPQTRPRRKRTAGSVEAAEMRDCNELSVGSRIKVWWPKDKRFYEGVVDSYDSAKGKHKILYVDGDVEVLNLKKQRWELITDHVPLDADQEIDLQQIEPVTSDIDDTRKGNSASGSAKGAKTIVAGLGVEHLLESPNRLLQNLLENLSMIPQLMNPLRLMNLQ 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1702 875 MobiDBLite consensus disorder prediction 539 577 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 309 388 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 713 729 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 260 295 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 325 347 - -
Prci12g1702 875 SUPERFAMILY ARM repeat 17 236 IPR016024 -
Prci12g1702 875 MobiDBLite consensus disorder prediction 269 295 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 348 364 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 709 729 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 366 388 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 542 556 - -
Prci12g1702 875 Gene3D - 727 788 - -
Prci12g1702 875 Pfam Sister chromatid cohesion protein PDS5 protein 27 230 - -
Prci12g1702 875 SUPERFAMILY Tudor/PWWP/MBT 741 779 - -
Prci12g1702 875 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 288 803 IPR039776 GO:0007064
Prci12g1702 875 CDD Tudor_Agenet_AtEML-like 741 791 - -
Prci12g1702 875 SMART TUDOR_7 737 796 IPR002999 -
Prci12g1702 875 FunFam Binding protein 737 788 - -
Prci12g1702 875 Coils Coil 26 46 - -
Prci12g1702 875 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1702 Prci-Chr12 34688258 34696956 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1702 - - pcin:129288220 1709.89