Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1547 ATGGCGGAGCCCAAGACTGTACACTCACCTGTCCTGACCTACTTTTCCATGATATCTCTTCTCTCACTTTGCCCTCCATTCGTCATCCTCTTATGGTATACAATGACACAAGCTGACGGGTCTGTTTTACAGACTTGGGATTATTTGAAACAGAATGGGCTGCAAGGATTTCTGAACATATGGCCCAGACCCACTGCTACGGCTTGGAAAATAATCGGTGTGTATGCTGCATTTGAAGCAGCACTTCAACTTCTTCTACCTGGTAAAAGGGTCGAGGGCCCCATATCTCCTACTGGCAACCGACCTGTGTACAAGGCAAATGGAGTGGCAGCATATTTGGTGACATTGATTACTTATATTGGCCTCTGGTGGTTTGGAATATTCAACCCAACAATTGTGTACGATCACTTGGGGGAGATATATTCAGCACTCATTTTTGGAAGCTTTGTCTTCTGTATTTTCTTGTACTTGAAAGGTCATTTTGCACCATCGTCTACTGATTCTGGCTCATCTGGGAACATGATCATCGATTTTTACTGGGGTATGGAGCTCTATCCACGAATTGGGAAAAATTTTGACATAAAAGTTTTTACAAATTGCAGATTTGGAATGATGTCTTGGGCTGTTCTTGCACTGACCTACTGCATAAAGCAGTATGAGGAAACTGGGAAAGTCGCTGACTCAATGCTTGTAAATACTGCATTAATGCTGGTGTATGTTAGCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCTCATGACCGAGCGGGTTTTTATATTTGCTGGGGCTGCTTGGTGTGGGTTCCATCTGTTTATACATCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGCACTCAGCTTGCAATCTTTATTCTTGTGGCTGGCATTCTCTGCATATACATCAACTATGATTGTGATAGGCAAAGACAAGAATTTCGTCGGACAAATGGGAAATGCTTAGTCTGGGGAAAACCTCCATTAAAGATAGAGGCCTCCTATACCACCACTACTGGTGAAACAAAAACCAGCCTTCTTTTAACATCCGGATGGTGGGGTTTATCTCGTCATTTCCATTATGTCCCAGAAATACTTTCTGCTTTCTTTTGGACAGTTCCTGCTCTATTCAATCACTTTTTGCCCTACTTCTATGTGATATTTCTTACCATCCTTCTCTTTGATCGAGCGAAAAGGGATGATGATCGGTGTAAATCCAAGTATGGTAAGTACTGGAAATTATATTGCAACAAGGTGCCTAGCAAAATCATTCCGGGAATCTACTGA 1305 0.423 MAEPKTVHSPVLTYFSMISLLSLCPPFVILLWYTMTQADGSVLQTWDYLKQNGLQGFLNIWPRPTATAWKIIGVYAAFEAALQLLLPGKRVEGPISPTGNRPVYKANGVAAYLVTLITYIGLWWFGIFNPTIVYDHLGEIYSALIFGSFVFCIFLYLKGHFAPSSTDSGSSGNMIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLALTYCIKQYEETGKVADSMLVNTALMLVYVSKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLAIFILVAGILCIYINYDCDRQRQEFRRTNGKCLVWGKPPLKIEASYTTTTGETKTSLLLTSGWWGLSRHFHYVPEILSAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCKSKYGKYWKLYCNKVPSKIIPGIY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1547 434 Pfam Ergosterol biosynthesis ERG4/ERG24 family 41 434 IPR001171 GO:0016020|GO:0016126|GO:0016628
Prci12g1547 434 ProSitePatterns Sterol reductase family signature 2. 398 421 IPR018083 GO:0016628
Prci12g1547 434 ProSitePatterns Sterol reductase family signature 1. 172 187 IPR018083 GO:0016628
Prci12g1547 434 Gene3D - 222 433 - -
Prci12g1547 434 FunFam Putative 7-dehydrocholesterol reductase 224 433 - -
Prci12g1547 434 PANTHER DELTA(14)-STEROL REDUCTASE 4 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1547 Prci-Chr12 33371766 33383865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1547 1 434 Miscellaneous Gene Families AT1G50430 84.562 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1547 K00213 - qsu:112034052 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1547 12 33371766 33383865 Prci12g1547 12 33371766 33383865 ECH