Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1546 ATGTCGTCTTATGACAATGTTGTTGGTGGGAAATTGAAGCTTAAGGGAAAGGCCCTGGATGTGAAGGCTGGTGGAGTGAAGAAGAAGAAGAAGAAGAATAAGAATCAAGATCAAATCTTAGAATCCACTGAAAATGAGTTTTTGGAAGGTGGAAGTGCTGAACAAGCTAAGGATCCTAATGATCAAGACATTGATCATGTGAACAAATCAATTGGGGAAGGGAAGGCTCCTCATTATGATGATCATCTTACACCGGCAGAGAGACGATACATCGAACAAAGAGAACAGCTTGATGTTCATAGATTGGCTAAGACTGCCAACAAATCTCACCGGGACAGAATTCAGGATTTCAATCAGTATTTGGCAAACATGAGCGAGCACTACGATATCCCCAAAGTAGGCCCTGGATGA 411 0.4209 MSSYDNVVGGKLKLKGKALDVKAGGVKKKKKKNKNQDQILESTENEFLEGGSAEQAKDPNDQDIDHVNKSIGEGKAPHYDDHLTPAERRYIEQREQLDVHRLAKTANKSHRDRIQDFNQYLANMSEHYDIPKVGPG 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1546 136 MobiDBLite consensus disorder prediction 56 82 - -
Prci12g1546 136 Pfam FAM32A 4 96 IPR013865 -
Prci12g1546 136 MobiDBLite consensus disorder prediction 23 82 - -
Prci12g1546 136 Coils Coil 26 46 - -
Prci12g1546 136 PANTHER UNCHARACTERIZED 1 136 IPR013865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1546 Prci-Chr12 33358319 33360520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1546 K13120 K00213 tcc:18595599 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1546 12 33358319 33360520 Prci12g1546 12 33358319 33360520 ECH