Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1443 ATGGCGGATCAGGAGGAGGTGCCGGAGGGGACGGTGGAGAACATACTGAGCCAAGAGAGTCTCAAGTGGGTTTTCGTCGGAGGAAAAGGAGGAGTTGGCAAGACAACTTGTAGCTCCATTCTTTCGATCCTTCTCGCCGGCGTTCGTGGCTCCGTTCTGATCATCTCCACCGACCCTGCTCACAATCTCAGTGATGCTTTTCAACAACGGTTCACGAAGACACCCACTTTGGTTAATGGGTTCACCAATCTTTATGCGTTGGAGGTGGATCCTACTGTTGAACAAGAGGAAACGAGTTCTGAGGGAATGGATACTTTGTTTTCAGAGCTAGCAGGTGCTATACCTGGAATTGACGAGGCAATGAGTTTTGCTGAGATGTTGAAATTGGTGCAAACAATGGATTATTCTGTTATAGTATTTGATACTGCACCCACAGGCCATACACTCAGACTTTTGCAGTTCCCAGCAGTTTTGGAAAAGGGTATTGCAAAAGTTTTGTCCTTGAAAAATAAATTTGGTGGTTTGATTAATCAGATGACCCGCATGTTTGGTGTGGAGGATGATTTTGGTGATGATGCACTTCTTGTGAGGCTTGAAGGCATGAAGGAGGTGATTGAACAAGTCAATAAGCAATTCAAGGATCCAGACATGACAACTTTTGTCTGTGTTTGCATTCCGGAGTTCCTCTCTCTGTATGAAACAGAGAGATTGGTTCAGGAACTCACAAAGTTTGAGATTGACACACACAATATCATAATTAATCAAGTAATCTTTGACGATGAAGACATTGAATCCAAGTTACTTAAAGCGAGAATGAAGATGCAACAGAAGTACCTAGACCAGTTTTATATGTTGTATGATGACTTTAACATTACAAAGCTACCACTGCTCCCAGAAGAGGTCACTGGGGTAGCAGCTTTGAAATCATTTTCTAGCCATTTTTTATCACCCTATCAATCCTTGGCCAGTAAAGATGAAGTAGAACGATTACAGAATAGAATATCAGCACTAAAGCAGCAGCTAAGTGAAGCTGAATCTGCACTTTCGAGACTCAAAAAGTGA 1062 0.4266 MADQEEVPEGTVENILSQESLKWVFVGGKGGVGKTTCSSILSILLAGVRGSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFTNLYALEVDPTVEQEETSSEGMDTLFSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPAVLEKGIAKVLSLKNKFGGLINQMTRMFGVEDDFGDDALLVRLEGMKEVIEQVNKQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDIESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVAALKSFSSHFLSPYQSLASKDEVERLQNRISALKQQLSEAESALSRLKK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1443 353 Pfam Anion-transporting ATPase 22 313 IPR025723 -
Prci12g1443 353 FunFam ATPase ASNA1 2 323 - -
Prci12g1443 353 Gene3D - 1 330 IPR027417 -
Prci12g1443 353 Hamap ATPase <gene_name> [GET3]. 8 322 IPR027542 GO:0005524|GO:0016887
Prci12g1443 353 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 10 331 IPR016300 GO:0005524|GO:0016887
Prci12g1443 353 Coils Coil 320 353 - -
Prci12g1443 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 310 IPR027417 -
Prci12g1443 353 CDD ArsA 37 311 - -
Prci12g1443 353 NCBIfam TRC40/GET3/ArsA family transport-energizing ATPase 25 313 IPR016300 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1443 Prci-Chr12 30868702 30875981 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1443 K01551 - gmx:100816517 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1443 12 30868702 30875981 Prci12g1443 12 30868702 30875981 ECH