Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1398 ATGCTTCATCAGCTGATGAGAGGTAAGCGAATTAGTGTGGTTGGATTGGGAAGCATTGGGTTGGAAGTTGCTAAAGGACTTGAAGATTTTGGATGCCTCATATCATACAACTCAAGGACGAACTCATCAGCTCCTTACAATTTTTATTCCAACGTTGTTGAGCTCGCAAGTTCCTGCGATGCACTCATAATCTGTTGTCCTTTAAACGAGCAAACAAGGCACATGATTAACAGAGAAATGATGCTGGCATTGGGAAAAGAAGTCATTATGAACGTTGGAAGAGGTGCTCTTATAGATGAAAAAGAATTGGTCAAGTGTTTGATGCAAGGAGAGATTGGAGGGGCTGGTTTGGATGTGTTTGAGGATGAACCTATCGTTCCTGAAGAGCTTTTCGATTTGGATAATGTTCTCTTATCTCCTCATCACGGCGCATACACTTCAGAATCTTTAATGGGTGTTGCTGAAGTTGTGAAACAGAACTTTAGAGCCTTCTTCTCCCATAAGCCGTTAATTGCTCCTTTGTTAGTTGATTAA 534 0.412 MLHQLMRGKRISVVGLGSIGLEVAKGLEDFGCLISYNSRTNSSAPYNFYSNVVELASSCDALIICCPLNEQTRHMINREMMLALGKEVIMNVGRGALIDEKELVKCLMQGEIGGAGLDVFEDEPIVPEELFDLDNVLLSPHHGAYTSESLMGVAEVVKQNFRAFFSHKPLIAPLLVD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1398 177 Gene3D - 147 170 - -
Prci12g1398 177 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 6 170 - -
Prci12g1398 177 Gene3D - 5 146 - -
Prci12g1398 177 FunFam Putative 2-hydroxyacid dehydrogenase 1 146 - -
Prci12g1398 177 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 4 143 IPR006140 GO:0051287
Prci12g1398 177 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 144 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1398 Prci-Chr12 29753828 29754362 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1398 K15919 - gmx:100776772 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1398 12 29753828 29754362 Prci12g1398 12 29753828 29754362 ECH