Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1393 ATGATGAATGACGAAAACACGGAAGAAGAGACGATGTATTGCTGCATTTCTCACGAGTTCTTCCGAGTAGCTTCAGCAAACCCTGACAAAATCGCAGTAATCCATGCTTCCGGTGTTGCCCAAGTTTCCAAGGAACTTCGTGAAAATTCTACTTCATCCTATTTCGGCGGAGATATTGTTGAGTCCTTAGACAAGCTTGTGAAATCGGTTTCTCCGCCTATGTACTTTGGGGACTACTGCTACACATACTCTGATTTGTTGAAGGCCGTTCACTCCCTTAGCTCTCGCCTCCGCTCCATCCTGCTTGGTGGGGATGATACCGATTTGATCAGACCCAAAGCTCAAGGCAATGATGATGTCAATAGTAGAGAAGGAAAAATTGGTCAAACACCTGAGTCCTTAGAAATTGTCATGTCTAGCGCAAAAACAGTGTCTTCTTCAATAACAGAGCACAGACCAAAGATCGTGGGAATATATATGCCACCTTCGGTAGAATATATTGTTGCTGTTCTCTCTGTTTTGAGGTGTGGAGAAGCTTTCTTGCCTTTGGATCCTTTTTGGCCAGACAGAAGGATACAATCGGTTGTTTCTTTTTCAAAAGCTGATCTCATTATAAAGTCCCGATCTTCATTTGGTAAAAGTAATTTAGATCAACCTGATGAATCACATTGGGCTGTACATTTGAGCAGTTGTCCTCTTTTAAACTTCTCTATGGAAGAAAACCTTCCAGAGTCTCCAGCAGATTTTTCATGGCCTTGTGAAAATGATAAAAAGAGATCCTTCTGTTATCTGATGTACACTTCAGGGTCAACCGGAAAGCCTAAAGGAGTATGCGGAACTGAACAGGGTCTTTTAAATCGATTTTTTTGGATGCAAAGAATGTATCCACTGGATGGGCAAGATTTACTGTTGTTTAAGTCATCAATTAGCTTTGTTGACCATCTACAAGAATTTCTCAGTGCTATTTTGACTGCTTGTGTGCTGGTTATTCCTCCCTTCTGCGAGATGAGCAATGCATACTGTCTTATAGGTTTTCTACAGGCTTATTGTATTAGTAGGCTGACAGCTGTTCCATCACTAATGAGAACAATACTCCCTGGACTGCGAAATCATGCTGGCATGCGGGTTCAATGTTCATTGAAATTGCTTGTGCTTAGTGGTGAAAATTTTCCTTTAACCTTGTGGGAGATGCTTTCTACTGTCTTACCATATACATTTATCTTGAATTTATATGGAAGTACTGAGGTCTCTGGTGATTGTACATATTTTGATTGCAAGAGGATGCCATTAATCCTGAAGTCAGATATGCTATCAAGTGTGCCAATAGGTGTGCCTATTTCAAACTGTGATGTGCTGCTTATTGGTGAAAATGATGCATCAAATGAGGGAGAACTATATGTTGGTGGTTCCTGCATTTCTAGAGGTTACTATGCTGTGCCTAATTTATTGTCTGAGGACTTTGTGGAATTGCCTCAAAATTATGGCTCCAGAGATTCTGTTGGTAGTTATCAAAAGCAATTATACTTTAGAACTGGTGATTTAGCCAAAAAGTTACAAAGTGGTGACTTTATATTTTTGGGAAGAAAGGACCGCATTATAAAAGTCAATGGACAGCGTATTGCTCTGGAAGAAATTGAAAATTTGCTCAGGGAACATCCAGATATAAATGATGCTTCTGTAATTTGTCAAAATAATCAAGGTGAACATGTGCTTCTGGAAGCATTTATAATACTAAAAGAGGCTGAAAGGCCTGGTGAATTATTAATGCCTTCAATCAGAAGTTGGATGATCAATAACCTTCCCTCAGTTGTGGTTCCAAATCATTTCATCTTTATGGAATCATTTCCTCTGACTGCTAGTGGTAAAGTTAATTATGAGGTTTTGGCGCGTTCAACTTTATTTACTAAGCATGTTGATAATAAGAATGGTAGCATAGGATGCAGTGACCTTCTACGACTCATCAAGAAGGCATTTTGTTATGTTTTAATGGTAGAAGAGTTTTGCAATGATGATGATTTCTTTAAAATGGGCGGGAACTCGCTTACTGCTGCGCATGTTGCTCACAGTCTGGGGATTGATATGAGACTCCTTTATGACTATCCGAGTCCTTTTAAGTTATGCATGGCTCTTCTGCAGAAGAAGGGATTATGTGCTTTGCATAAAGACCTGGATAATTGTTCAAAATTTAACGTTGACACACAAAATCTTATTTCTTCCAATCTTTCTGAAAATGCTGATTCTCTTCTTCAACCAATGGGCATTTCTGATGGTGATGGCAATTGTTCTTTCCCTTGCAAACGTTTGAAGAGGGATCTTACCATGGACTTTATTACATCAGGGGGTGATGGGTCTATCCGTTGGTGTTCTTCCTCAATGCTTTTATCATGTTCAATTAGCCGCTGCAACAAGGTCTTGTTTAAAAAGCAACCTGGAATAATTGATACACATCAAACAACTTGGTCTCTGAAAGTACCTAGAAGTAAAAGGGGTCATATGAAAGATTTGTGGAAGGTTTATATGGAATCTTGTGTTGATGCATCACCAATGCTTGTGTTTAGAGGCTCAGACATTTATTTGTTCATTGGATCTCACTCGAATAAATTTCTTTGTATTAATGCCAGAAGTGGTTCTGTTCAGTGGGAGACCAAACTGGAAGGACGGGTTGAATGTTCTGCAGCAATTGTTTGTGACTTTTCGCAGGTGATTGTTGGATGTTACAAGGGGAAAATTTACTTTCTTGATTTTTCCAATGGAAACATTTGTTGGTGTTTTCAAACATCTGGAGAGGTAAAATCACAACCAGTTGTAGATACAGCCAGACAATTGATATGGTGCGGTTCGCATGACCATAACTTATATGCTCTTGATTACAAAAGACATTGTTGTGTCTATAAGCTACCTTGTGGAGGTAGTATATATGGGTCGCCTGCAATTGATGGGGTTCGTGGTGCCCTTTACGTTGCTTCAACTGGTGGCCGTGTGACAGCTATATCAATTAGGGATTTTTCATTTAATACTTTGTGGCTTCAAGAGCTAGAGGTCCCAGTTTTTGGTTCTCTGGCCGTCAATCAGAATGGGATAATTATATGCTGCTTGGTAGATGGCCACGTTATTGCATTGGATCCAGATGGGTCCATAATTTGGAAGAAAACAACTAATGGTCCAATATTTGCTGGAGCATGTATATCCTCTGCTCTTCCATCTGAGGTGCTTGTTTGCTCCAGAGATGGAAGTGTGTACTCATTTAAACTGGATAAGGGCGATCTACAATGGCAATACAATGTTGGAGATCCAATTACTGCATCTGCCTATGTTGATGAACACTTGCTGCTCAAGTCTGATTCCTGCCGTTATTCAGACAGGTTAATTTGCATATGTTCCAGTTCTGGAGGTATACACATTCTTAGAGTGAACTTGAATGAAGTTGAAGATACTGATCAACCAAGAACTAGTATGGAGGAATGTGCCAGGATAAATTTGGAGGGAGATATATTCTCTTCACCTGTAATGATTGGTGGCAGAATTTTCGTGGGATGCAGGGATGATTACTTGCATTGCATTTCTCTTGAATTTCCATCTGACACTTGA 3588 0.3974 MMNDENTEEETMYCCISHEFFRVASANPDKIAVIHASGVAQVSKELRENSTSSYFGGDIVESLDKLVKSVSPPMYFGDYCYTYSDLLKAVHSLSSRLRSILLGGDDTDLIRPKAQGNDDVNSREGKIGQTPESLEIVMSSAKTVSSSITEHRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPDRRIQSVVSFSKADLIIKSRSSFGKSNLDQPDESHWAVHLSSCPLLNFSMEENLPESPADFSWPCENDKKRSFCYLMYTSGSTGKPKGVCGTEQGLLNRFFWMQRMYPLDGQDLLLFKSSISFVDHLQEFLSAILTACVLVIPPFCEMKXNAYCLIGFLQAYCISRLTAVPSLMRTILPGLRNHAGMRVQCSLKLLVLSGENFPLTLWEMLSTVLPYTFILNLYGSTEVSGDCTYFDCKRMPLILKSDMLSSVPIGVPISNCDVLLIGENDASNEGELYVGGSCISRGYYAVPNLLSEDFVELPQNYGSRDSVGSYQKQLYFRTGDLAKKLQSGDFIFLGRKDRIIKVNGQRIALEEIENLLREHPDINDASVICQNNQGEHVLLEAFIILKEAERPGELLMPSIRSWMINNLPSVVVPNHFIFMESFPLTASGKVNYEVLARSTLFTKHVDNKNGSIGCSDLLRLIKKAFCYVLMVEEFCNDDDFFKMGGNSLTAAHVAHSLGIDMRLLYDYPSPFKLCMALLQKKGLCALHKDLDNCSKFNVDTQNLISSNLSENADSLLQPMGISDGDGNCSFPCKRLKRDLTMDFITSGGDGSIRWCSSSMLLSCSISRCNKVLFKKQPGIIDTHQTTWSLKVPRSKRGHMKDLWKVYMESCVDASPMLVFRGSDIYLFIGSHSNKFLCINARSGSVQWETKLEGRVECSAAIVCDFSQVIVGCYKGKIYFLDFSNGNICWCFQTSGEVKSQPVVDTARQLIWCGSHDHNLYALDYKRHCCVYKLPCGGSIYGSPAIDGVRGALYVASTGGRVTAISIRDFSFNTLWLQELEVPVFGSLAVNQNGIIICCLVDGHVIALDPDGSIIWKKTTNGPIFAGACISSALPSEVLVCSRDGSVYSFKLDKGDLQWQYNVGDPITASAYVDEHLLLKSDSCRYSDRLICICSSSGGIHILRVNLNEVEDTDQPRTSMEECARINLEGDIFSSPVMIGGRIFVGCRDDYLHCISLEFPSDT 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1393 1196 SMART ire1_9 893 926 IPR018391 -
Prci12g1393 1196 SMART ire1_9 852 884 IPR018391 -
Prci12g1393 1196 SMART ire1_9 1065 1095 IPR018391 -
Prci12g1393 1196 SMART ire1_9 1022 1052 IPR018391 -
Prci12g1393 1196 Pfam AMP-binding enzyme 155 536 IPR000873 -
Prci12g1393 1196 SUPERFAMILY ACP-like 649 709 IPR036736 -
Prci12g1393 1196 PANTHER BETA-ALANINE-ACTIVATING ENZYME 13 1191 - -
Prci12g1393 1196 FunFam Putative acyl-activating enzyme 19 1003 1191 - -
Prci12g1393 1196 SUPERFAMILY Acetyl-CoA synthetase-like 14 631 - -
Prci12g1393 1196 ProSitePatterns Putative AMP-binding domain signature. 264 275 IPR020845 -
Prci12g1393 1196 ProSitePatterns Phosphopantetheine attachment site. 676 691 IPR006162 -
Prci12g1393 1196 Gene3D - 128 530 IPR042099 -
Prci12g1393 1196 Gene3D - 815 1004 IPR015943 GO:0005515
Prci12g1393 1196 Gene3D - 1005 1192 IPR015943 GO:0005515
Prci12g1393 1196 Pfam PQQ-like domain 983 1188 IPR002372 -
Prci12g1393 1196 Gene3D - 648 716 IPR036736 -
Prci12g1393 1196 Pfam PQQ enzyme repeat 902 936 IPR002372 -
Prci12g1393 1196 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 836 1191 IPR011047 -
Prci12g1393 1196 CDD A_NRPS 151 629 - -
Prci12g1393 1196 Gene3D - 531 641 IPR045851 -
Prci12g1393 1196 FunFam Putative acyl-activating enzyme 19 823 1002 - -
Prci12g1393 1196 Pfam AMP-binding enzyme C-terminal domain 545 623 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1393 Prci-Chr12 29567848 29593270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1393 263 631 Acyl Lipid Metabolism Gene Families AT5G36880 21.984 2.57e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1393 K00142 - gmx:100820175 1682.54