Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1302 ATGTCGCTGTCGGATTCTGAAACAAATCAAGGAGGATCATCAGAAAATAAACCCTTCCGCCAAATCAGCCGTGACCGGTTATTATTTGAAATGCTTGGAGCAACAAATTCAGGAGATTCTAAATCATGGAAGGTTCTCATAATGGATAAAGTCACATTGAAAGTTATGTCACATTCATGCAAAATGGCAGATATCACAGACCAAGAAGTTTCGTTGGTGGAAGACATTTTCAAGAGAAGGCAACCATTACCATCTATGGATGTTGTTTATTTCATGCAGCCAGTAAAAGAGAATATTATCATGTTAATATCTGACATGTCTGGAAGGGAGCCCTTGTACCGGAAAGCATTCATATTTTTTAGCTCACCAGTTCCCAAGGACTTTATAAACCACATTAAGTGTGATACAAGTGTCTTACCCCGCATTGGTGCATTAAAAGAGATGAATTTGGAATACTTTCCAGTAGATAGCCAGGCTTTTACCACTGATCAAGATATGGCAATGGAGGAACTTTTCGGAAATATTGACAATACACGAAGATTTAACACATGCTTGAATGTTATGGCAACTCGAATAGCTACAGTGTTTGCTTCACTGAAGGAGTTACCTCATGTGTGGTATCGTGTGGCCAAGGAAGGTGAAGGATCAACAGCTCGGGATTTGGTTCCTTCCAAGCTTGCTGATGCAGTTTGGGATATAATTTCTAAATATAAAAATAGTATTCCAAACTTTCCAAAGAATGAAACATGTGAATTGCTCATTTTAGATAGATCTATTGATCAGATTGCTCCTATCATTCATGAATGGACCTATGATGCAATGTGTCATGATTTGTTGCCTCTGGAGGGAAATAAATATATATATGAGGTTCCTAGCAAAACAGGGGGTGATTCTGAAAGAAAAGAGGCACTCCTTGAAGAACATGATTCAGTGTGGCTTGAGATTCGACATGCACATATAGCAGATGCTAGTGAAAGACTGTCTGACAAGATGGATAACTTTGTAGCAAAAAACAAAGCTGCACAAATCCATCAAAGTGCAAGAGATGGTAGTGAATTGTCCACACGAGATTTGCAGAAAATGGTTCAAGCCTTGCCTGAATACACTGAGACAATGGAAAAGATTTCTCTCCATGTAGAGATAGCTGGAAAGATGAACAAAATTATTAGAGATACAGGGCTCCGAGATCTTGGACAATTGGAACAGGATCTTGTTTTTGGAGATGCAGGAGCGAAGGAAGTTATTAACTATCTAAGAACAAAGCAGCAGGAAACACCAATCGAAAATAAATTGCGTTTACTAATGATTTATGCAATCGTCTATCCTGAAAAGTTTGAGGGAGATAAAGCTACAAAGTTGATGCAGTTGGCAAAACTATCACCTATTGACATGAAGGCCATTAGTAACATGCAAATGTTGACTGGATCATCAGACAAGAAGTCATCTAGTGGTATTGATTTTTCACTCAAGTTCAGTAACCAGAAGAAAAAGAATGCAGCACGGAAAGATCGTACTGATGAGGAGGAAGCATGGCAACTATTTCGATTTTACCCCATGATAGAGGAACTTATTGAAAATCTCAACAAGGGCGAGTTACCAAAAAGTGACTATTCATGTAAAAATCAACCAAGTCCCCCCACCCAAGTAAGCACTAGAGGTGGGCAACGCCCACAGACAACTGCTACTAATAATCCACATTCAATAAGATCAAGACGGACTGCCAACTGGGGACGATCTCGTCATTCAGATGATGGATATTCAAGTGACTCTACGCTGAAGAATCTCGATAATGATTTCAAGAAGATGGGGAAGCGCATATTTGTGTTTATCATTGGTGGGGCTACTCGATCAGAGAAGTTGAAGTTATTATTTGAAGGCCAAGCAGCATTGGATGGCCTCGGAATCTAA 1908 0.3947 MSLSDSETNQGGSSENKPFRQISRDRLLFEMLGATNSGDSKSWKVLIMDKVTLKVMSHSCKMADITDQEVSLVEDIFKRRQPLPSMDVVYFMQPVKENIIMLISDMSGREPLYRKAFIFFSSPVPKDFINHIKCDTSVLPRIGALKEMNLEYFPVDSQAFTTDQDMAMEELFGNIDNTRRFNTCLNVMATRIATVFASLKELPHVWYRVAKEGEGSTARDLVPSKLADAVWDIISKYKNSIPNFPKNETCELLILDRSIDQIAPIIHEWTYDAMCHDLLPLEGNKYIYEVPSKTGGDSERKEALLEEHDSVWLEIRHAHIADASERLSDKMDNFVAKNKAAQIHQSARDGSELSTRDLQKMVQALPEYTETMEKISLHVEIAGKMNKIIRDTGLRDLGQLEQDLVFGDAGAKEVINYLRTKQQETPIENKLRLLMIYAIVYPEKFEGDKATKLMQLAKLSPIDMKAISNMQMLTGSSDKKSSSGIDFSLKFSNQKKKNAARKDRTDEEEAWQLFRFYPMIEELIENLNKGELPKSDYSCKNQPSPPTQVSTRGGQRPQTTATNNPHSIRSRRTANWGRSRHSDDGYSSDSTLKNLDNDFKKMGKRIFVFIIGGATRSEKLKLLFEGQAALDGLGI 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1302 635 PIRSF VPS45_Sec1 15 625 IPR001619 GO:0016192
Prci12g1302 635 Gene3D - 12 147 IPR043154 -
Prci12g1302 635 Gene3D - 391 517 - -
Prci12g1302 635 Pfam Sec1 family 44 618 IPR001619 GO:0016192
Prci12g1302 635 SUPERFAMILY Sec1/munc18-like (SM) proteins 19 625 IPR036045 -
Prci12g1302 635 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 268 390 IPR043127 -
Prci12g1302 635 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 31 618 IPR001619 GO:0016192
Prci12g1302 635 Gene3D - 153 618 IPR027482 -
Prci12g1302 635 MobiDBLite consensus disorder prediction 534 592 - -
Prci12g1302 635 MobiDBLite consensus disorder prediction 535 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1302 Prci-Chr12 27349646 27382261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1302 K15292 - gmx:100783301 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1302 12 27349646 27382261 Prci12g1302 12 27349646 27382261 ECH