Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0832 ATGACGACCATGGAGAGCTTGATTGGGTTGGTGAACCGTATCCAGAGGGCTTGTACTGTTCTCGGTGACTATGGAGGTGGTGACAACGCGTTTTCTTCTCTCTGGGAAGCCCTTCCTTCCGTTGCTGTCGTCGGTGGTCAGAGTTCCGGGAAGTCTTCCGTTTTGGAGAGTATTGTTGGTCGTGACTTTCTTCCCAGAGGGTCAGGGATTGTGACTAGACGTCCTTTGGTGCTGCAGCTTCATAAAACGGATGAAGGATCGCAAGAATATGCCGAATTCCTTCACTTGCCTAGGAGAAAGTTCACCGACTTCTCCCTGGTTCGCCAGGAAATTCAAGATGAAACTGATAGAGTCACAGGAAAGAACAAACAAATATCTCCTATTCCAATTCATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACCTTGATTGATTTACCGGGTTTGACCAAAGTTGCTATAGAAGGACAGCCTGAGACTATTGTTCAAGACATTGAAATGATGGTTCGATCTTATGTTGAGAAGCCTAATTGCATTATACTAGCAATATCTCCAGCCAACCAAGACATAGCAACGTCTGATGCTATTAAACTTTCCAGGGAAGTGGATCCCACAGGTGAACGTACATTTGGGGTGTTGACAAAATTGGACCTAATGGATAAAGGAACCAATGCATTGGAAGTCCTAGAAGGAAGATCTTACCGCTTGCAGCATCCTTGGGTTGGTATTGTGAATCGATCCCAAGCTGATATCAATAAAAATGTTGATATGATTGTGGCTAGACGCAAGGAGCGTGAGTACTTTGCCACCAGTGCTGACTATGGGCACTTAGCCAATAAAATGGGTTCAGAGTACCTTGCAAAACTTCTATCACAGCACTTGGAGTCAGTAATCAGGGCACGGATACCTAGTATAACATCTTTGATAAACAAAACCATTGACGAACTTGAATCAGAGATGGATCATCTTGGGAGACCTATTGCTTCTGATGCTGGGGCTCAATTATACACCATACTGGAACTTTGCCGAGCATTTGATCGGATATTCAAGGAGCATTTAGACGGCGGGCGACCAGGAGGAGATAGGATATATAATGTCTTTGACAATCAGGTGCCTGCTGCTTTACGGAAGCTCCCATTTGACCGGCATCTTTCTATTCAGAATGTAAGGAGAGTGGTATCAGAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCGGAGCAAGGTTATCGGCGTTTGATTGAGGGGTCTCTTAATTACTTTAGAGGCCCGGCTGAAGCTTCAGTTGATGCTGTTCACTTTGTCTTGAAAGAACTTGTGAGAAAATCAATGGCTGAAACCCAGGAACTGAAGCGTTTTCCAACTCTCCAAGCTGAAATAGCTGCAGCTGCAAATGAGGCGTTAGAAAGGTTCCGTGAAGAGAGTAAGAAGTGTACTATTCGGCTTGTTGACATGGAAGCTTCTTACCTTACTGTAGATTTCTTCCGGAGACTTCCACAAGATATTGAGAAAATTGGAAATGGAAATACTGCTCCTCCACCAACTGTGGATCGTTATTCAGAGGGCCACTTCAGGAGGATTGCTTCAAACGTGTCATCCTACATAGGTTTGGTGGCAGATACTCTCAGGAACACCATTCCTAAGGCTGTTGTTTATTGTCAGGTCAGAGAAGCAAAGCATTCGTTGCTAAACCATTTCTATGTGCAAATAGGGAAGAAAGAGGGTAAGCAGCTATTAGAATTGTTAGATGAAGACCCTGCATTAATGGAGAGGAGACAACAATGTTTCAAAAGGCTTGAACTGTACAAAGCAGCGAGAGATGAAATTGATTCTGTTTCATGGGCACGATGA 1854 0.4412 MTTMESLIGLVNRIQRACTVLGDYGGGDNAFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDEGSQEYAEFLHLPRRKFTDFSLVRQEIQDETDRVTGKNKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAIEGQPETIVQDIEMMVRSYVEKPNCIILAISPANQDIATSDAIKLSREVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARRKEREYFATSADYGHLANKMGSEYLAKLLSQHLESVIRARIPSITSLINKTIDELESEMDHLGRPIASDAGAQLYTILELCRAFDRIFKEHLDGGRPGGDRIYNVFDNQVPAALRKLPFDRHLSIQNVRRVVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLKELVRKSMAETQELKRFPTLQAEIAAAANEALERFREESKKCTIRLVDMEASYLTVDFFRRLPQDIEKIGNGNTAPPPTVDRYSEGHFRRIASNVSSYIGLVADTLRNTIPKAVVYCQVREAKHSLLNHFYVQIGKKEGKQLLELLDEDPALMERRQQCFKRLELYKAARDEIDSVSWAR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0832 617 ProSiteProfiles GED domain profile. 525 617 IPR020850 -
Prci12g0832 617 Pfam Dynamin central region 225 492 IPR000375 -
Prci12g0832 617 Gene3D Dynamin, middle domain 326 581 - -
Prci12g0832 617 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 304 IPR030381 GO:0005525
Prci12g0832 617 Pfam Dynamin family 41 216 IPR045063 -
Prci12g0832 617 Gene3D - 4 313 IPR027417 -
Prci12g0832 617 FunFam dynamin-related protein 1E 4 313 - -
Prci12g0832 617 PANTHER DYNAMIN 5 613 IPR022812 -
Prci12g0832 617 SMART dynamin_3 4 255 IPR001401 GO:0003924|GO:0005525
Prci12g0832 617 SMART GED_2 520 613 IPR003130 GO:0003924|GO:0005525
Prci12g0832 617 PRINTS Dynamin signature 63 80 IPR022812 -
Prci12g0832 617 PRINTS Dynamin signature 136 153 IPR022812 -
Prci12g0832 617 PRINTS Dynamin signature 205 221 IPR022812 -
Prci12g0832 617 PRINTS Dynamin signature 38 56 IPR022812 -
Prci12g0832 617 PRINTS Dynamin signature 186 204 IPR022812 -
Prci12g0832 617 PRINTS Dynamin signature 228 247 IPR022812 -
Prci12g0832 617 FunFam Dynamin-related protein 1C 335 593 - -
Prci12g0832 617 CDD DLP_1 38 304 IPR001401 GO:0003924|GO:0005525
Prci12g0832 617 Pfam Dynamin GTPase effector domain 521 613 IPR003130 GO:0003924|GO:0005525
Prci12g0832 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 312 IPR027417 -
Prci12g0832 617 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0832 Prci-Chr12 8985897 8993337 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0832 - - cpap:110814826 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g0832 12 8985897 8993337 Prci12g0832 12 8985897 8993337 ECH