Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0830 ATGGCTTCTCAACCAGGCATTCTTACAGATTGGCCTTGGAAGCCTCTTGGGAGCTTTAAGCACATGACATTAGCCCCATGGGTGGTCCATACCATTTACTCTCTCACGACGTCGTATGAGAGGGACTTGGTTTACTATCTCATACTTCCAATGTTAATGGCGAGGATAGTGCACAGCCAGATCTGGATATCTGTTTCTCGACATCGAACAGCTCAAGGCAAAAACAGGATTGTTGATAGAGGCCTTGAATTCTCACAAGTTGACAGGGAAACCAATTGGGATGACAATATTTTGCTGACCGGACATATAATGTACATAGTGTACATAATACTTCCTGAGATTTTTCATCACTTACCCTTATGGAGAACAGAAGGTGTGATTCTCATGGTTTTATTGCATGCTGGTCCTGTCGAGTTTCTTTATTATTGGCTTCACAAAGCTCTTCACCATCACTTCCTTTATTCTCGCTACCATTCTCACCATCATTCTTCCATTGTCACCCAGCCTATTACTGCTGTTGCTCATCCATTTGCTGAGGTCTTAGCATATATTACTCTATTCGCAATACCACTATTTGTAACGTTGTTCACAAAGACTGCTTCCGGTGCTTCTGTTTATGGTTACTTGTTTTATATCGATTTCATGAACAACTTGGGTCACTGCAACTTTGAGTTCTTCCCAAAGAAGCTGTTCTCTCTCTTTCCCTTTTTGAAGTATCTCACCTACACTCCATCGTTTCACTCACTGCATCACACCAGATTCAGGACAAACTATTGCCTTTTCATGCCAATCTATGACTACATTTATGGTACTGTGGATGAATCCACAGATGAAACTTATGAAACATCTTTGAAGAGACCAAATGACTCACCAAATGTGGTTCACTTGACTCATCTAACAACGTTGGATTCCATCTATCATCTTCCATTAGGGTTTGCTTCCTTGGCCTCCAAACCTCAAACATCAAAATGGTATCTTCATTTCATGTGGCCTTTCACTTTTGGTTTTATTCCATTGGCTTGGATCTTTGGTCGTACATTTGTTTCAGAAAGGAACACTTTCAAAAAACTCAATTTGCAGTCATGGGTCATACCACGATTCACAAAACATTATTTGAAGGGAAAGAGCACATCACTGAACAAATTAATTGAAGAGGCAATATTAGAGGCTGAATCATCTGGAGCTAAAGTATTGAGTCTTGGGCTTCTTAATCAGGTGGCTATACTATACAAGGATAAGTTGACGAAGCTTCATTCAAGAGTACTCAAGTCCAAAGTAAGCCTTACTCTCACGACAAACTATGATGCCAAGATATGGTTGGTGGGAGATGGATGGGATGAAGATGAACAGATGAAAGCATCAAAAGGAACATTATTCATACCATATTCTCAATTTCCTCCAAAGAAAATGAGAAAGGATTGCTTCTACCACTGTACTCCTGCCATGATGGCTCCTCTCTCATTCACCAATGCACATGCTTGTGAGAATTGGTTACCAAGGAGAGCAATGAGTGCTTGGCGAATAGCAGGAATAGTACATGCCTTAGAAGAATGGAATGTTCACGAGTGTGGCTCTACCATTTTCAACATCAATCAAATATGGCATGCAAGCATTCGTCATGGTTTCCAACCTTTGGATATTCCCTTTTGA 1650 0.4061 MASQPGILTDWPWKPLGSFKHMTLAPWVVHTIYSLTTSYERDLVYYLILPMLMARIVHSQIWISVSRHRTAQGKNRIVDRGLEFSQVDRETNWDDNILLTGHIMYIVYIILPEIFHHLPLWRTEGVILMVLLHAGPVEFLYYWLHKALHHHFLYSRYHSHHHSSIVTQPITAVAHPFAEVLAYITLFAIPLFVTLFTKTASGASVYGYLFYIDFMNNLGHCNFEFFPKKLFSLFPFLKYLTYTPSFHSLHHTRFRTNYCLFMPIYDYIYGTVDESTDETYETSLKRPNDSPNVVHLTHLTTLDSIYHLPLGFASLASKPQTSKWYLHFMWPFTFGFIPLAWIFGRTFVSERNTFKKLNLQSWVIPRFTKHYLKGKSTSLNKLIEEAILEAESSGAKVLSLGLLNQVAILYKDKLTKLHSRVLKSKVSLTLTTNYDAKIWLVGDGWDEDEQMKASKGTLFIPYSQFPPKKMRKDCFYHCTPAMMAPLSFTNAHACENWLPRRAMSAWRIAGIVHALEEWNVHECGSTIFNINQIWHASIRHGFQPLDIPF 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0830 549 PANTHER STEROL DESATURASE 20 544 - -
Prci12g0830 549 Pfam Fatty acid hydroxylase 135 271 IPR006694 GO:0005506|GO:0008610|GO:0016491
Prci12g0830 549 Pfam WAX2 C-terminal domain 405 544 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0830 Prci-Chr12 8942636 8955208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0830 1 545 Lipid Metabolism Gene Families AT1G02190 52.412 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0830 K15404 - qsu:112030629 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g0830 12 8942636 8955208 Prci12g0830 12 8942636 8955208 ECH